| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0816 |
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| Symbol | |
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| ID | 4625457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 1018934 |
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| End bp | 1020433 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639796016 |
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| Product | NusA antitermination factor |
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| Protein accession | YP_942258 |
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| Protein GI | 119944578 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.706967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00205757 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATAAAG AAATTTTACT TGTAGTAGAG GCGGTCTCTA ATGAAAAAGG ACTTCCACGT
GAAGCTATTT TTCAAGCTTT AGAAAGCGCA CTAGCGATCG CAACTAAAAA GAAATATGAA
AACGATATCG AAGTACGTGT TGAAATCGAC CGTGAATCGG GTAAATTTGA TACTTTTCGT
CGTTGGTTAG TGCTAGAACC CGATGCTAAG ATGGAAAACC CGTGTAAAGA AATGACTTTT
GAGGCGGCTG AATATGAAAC GCCGGAAATT AAAGTTGGCG ACTATATAGA AGATGAAATT
GAGTCGGTAA CCTTTGATCG GATCACCACA CAAACTGCCA AACAAGTGAT TGTACAAAAA
GTACGCGAAG CTGAACGTGC TCAAGTTGTC GCGCAGTACG CCGAGCAAGA AGGCGAGCTA
ATCACCGGTA TTGTTAAGCG TATGAATCGC GATAATATTT TATTGGACTT AGGCGGTAAC
GCTGAAGCCG TTATCTTCCG TGATGAAATG TTACCCCGCG AAAATTTCCG TCCGGGCGAT
CGTCTGCGCG GCCTTTTATT TGCAGTTCGA CCTGAGGCGC GAGGCGCACA ACTTTTCGTG
ACCCGTACAC AACCTGAAAT GCTGATTGAA CTTTTCCGGT TAGAAGTGCC TGAAATCGCA
GAAGAGATGA TTGATCTTAT GGGTGCTGCC CGAGATCCTG GTTCGCGTGC AAAAATTGCT
GTGAAATCAA ATGATAAACG TATTGATCCT GTTGGTGCTT GTGTTGGTAT GCGCGGTGCG
CGTGTACAAG CTGTTTCAAG CGAATTAGGT GGCGAGCGTG TTGATATCAT TTTGTGGGAT
GAAAATCCTG CGCAATATGC CATCAACGCA ATGTCGCCTG CCGATGTTGT TTCGGTTGTG
ATTGATGAAG ATGCTCACAG CATGGACATT GCTGTTGAAG AAGATAATTT AGCACAAGCG
ATTGGGCGTA ATGGTCAAAA TGTGCGTCTG GCATCTCAAC TTACGGGTTG GGAACTGAAT
GTAATGACCG TGGTACAATT GCGCGAAAAA CATCAAGCTG AGGCTGCGAG CGTGATCAGT
GTCTTTACTG AAGCACTTGA GATTGATGAA GAGTTCGCTG CTGTTTTGGT GGAAGAGGGT
TTCAGTTCAT TAGAAGAAAT TGCTTATGTT CCACTGAATG AATTATTGGC TATTGATGGT
TTAGATGAAG CGCTTATTGA TGAGTTACGT GTCCGTGCGA AAGACTTTTT AGCCACTAAA
GCACTGGTAG ATGAAGAAGG CCTAGAAGAT ACAAAACCAG CAGATGATCT TCTAGCGCTT
GAGGGTTTAG AGGGTCATTT AGCATATGTG CTAGCAAGCA AAGGTATTAT TACCCTTGAA
AATCTTGCCG AGCAAGCTGT TGATGATTTA CTTGAAATTG AAGAACTAAA CGAAGCAAAA
GCAGGGGAGC TGATCATGGC TGCTCGTAAC ATCTGTTGGT TCAGCGAAGA CGCTGAATAA
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| Protein sequence | MNKEILLVVE AVSNEKGLPR EAIFQALESA LAIATKKKYE NDIEVRVEID RESGKFDTFR
RWLVLEPDAK MENPCKEMTF EAAEYETPEI KVGDYIEDEI ESVTFDRITT QTAKQVIVQK
VREAERAQVV AQYAEQEGEL ITGIVKRMNR DNILLDLGGN AEAVIFRDEM LPRENFRPGD
RLRGLLFAVR PEARGAQLFV TRTQPEMLIE LFRLEVPEIA EEMIDLMGAA RDPGSRAKIA
VKSNDKRIDP VGACVGMRGA RVQAVSSELG GERVDIILWD ENPAQYAINA MSPADVVSVV
IDEDAHSMDI AVEEDNLAQA IGRNGQNVRL ASQLTGWELN VMTVVQLREK HQAEAASVIS
VFTEALEIDE EFAAVLVEEG FSSLEEIAYV PLNELLAIDG LDEALIDELR VRAKDFLATK
ALVDEEGLED TKPADDLLAL EGLEGHLAYV LASKGIITLE NLAEQAVDDL LEIEELNEAK
AGELIMAARN ICWFSEDAE
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