Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0811 |
Symbol | |
ID | 4626384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 1013086 |
End bp | 1015077 |
Gene Length | 1992 bp |
Protein Length | 663 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639796010 |
Product | ATP-dependent metalloprotease FtsH |
Protein accession | YP_942253 |
Protein GI | 119944573 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.569146 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0043584 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAATGATA TGGCAAAAAA CCTGATATTG TGGTTAGTCA TCGCAGTAGT ATTGATGTCT TTATTCCAAG GCTTTGGAAA AGACGATGCA AAACGGTCGA AAATAGACTA CACCACATTC GTAAAAGAAA TTAGCGGAGG ACAAGTTCAG CAAGTTCAAA TTGATGGCGA AGTGGTCAAA GGGATTAGAA ATAATCAAAC TCCTTTTGTT ACTTATATTC CATCACCCGA TCTTGATTTA TTGAACGATT TAATTAAAAA CAATGTAAAG GTTGAAGGTA CACCTCCGGA GGAAACAAGC TTTTTAACGT CTATTTTTGT TTCCTGGTTC CCGATGTTGT TATTAATCGG CGTCTGGGTT TTCTTCATGC GTAATATGCA GGGCGGCGGT AAAGGCGGCG CAATGTCATT TGGTAAAAGT AAAGCCAAGT TGATGGGCGA AGACCAAATC AAAACAACCT TTGCCGATGT GGCTGGTTGT GATGAAGCCA AAGAAGATGT TAAAGAATTG GTGGATTACT TAAAAGATTC AACCAAGTTT CAAAAGTTAG GTGGCCGTAT TCCAACGGGT GTATTACTTG TCGGACCTCC CGGCACAGGT AAAACACTGC TTGCAAAAGC CATTGCTGGT GAAGCTAAAG TACCTTTCTT CTCTATTTCT GGTTCCGATT TTGTGGAAAT GTTTGTCGGT GTTGGTGCAT CCCGTGTACG TGATATGTTT GAGCAAGCTA AAAAATCAGC GCCTTGTATC ATCTTTATTG ATGAAATTGA TGCCGTAGGT CGCCAACGTG GCGCAGGTAC AGGCGGCGGT AATGATGAGC GTGAGCAGAC CTTAAACCAA ATGTTAGTTG AGCTGGATGG TTTTGAAGGT AATGAAGGTA TTATTGTGGT TGCTGCAACT AACAGACCCG ATGTACTTGA TCCCGCGTTA TTAAGACCCG GCCGTTTCGA TCGTCAAGTT GTTGTATCTT TACCGGATGT GCGCGGCAGA GAACAGATTT TAAATGTTCA TATGCGGAAA ATTCCTCTGT CTGATGATGT TAAAGCCAAT GTTTTAGCGC GCGGTACACC GGGGTTTTCT GGTGCGGATC TGGCCAACTT AGTGAATGAA GCAGCATTGT TTGCGGCACG CAGTAATAAG CGCACCGTTA ATGCAGAAGA TTTCGAACAG GCCCGCGATA AGATCTTAAT GGGTGCTGAA CGTCGCAGTT TAGTGATGAC GGAAAAAGAT AAAGAATCAA CCGCTTATCA TGAAGCGGGT CATGCGATTG TCGCTAAATT AGTGCCACAG CATCATCCTA TTCATAAAGT GACTATTATC CCCCGTGGGC GATCATTAGG TGTTACTCAG TTTTTACCCG AGGGTGATCA GATCAGTCAA AATCGTACTG AGCTTGAAAG CAGTATTTCA GTGGCTTACG GTGGCCGTAT CGCTGAAGAG CTTATTTATG GTCTTGATAA AGTCTCAACC GGTGCATCAC AGGATATAAA ACAAGCTTCT GCTATTGCCC GTGCGATGGT GACAGAATGG GGTTTCTCAG AAAAATTGGG GCCTATTTTA TTAACGGTGG ATTCCAATAC GTTACGATCT AATCTTCTTT CTCCTGAAAC CGGAAGAATT ATCGATGACG AAGTGAAATT CTTTATTGAT AAAAATTACC AGCGGGCTGA AAAAATCTTA ACCGACAATA TCGACATATT ACATGCAATG AAAGATGCAT TAATGAAATA TGAAACGATT GATACCACTC AGGTTGATGA TTTGATGGCA CGGGTTGTGG TTCGTCCACC GTCGGATTGG ACTGAGGAAG ATTCTGTTAA AGCAGAGGCT AGCGATAAAC CGTCTGATAT TGATTTGAGT AAAAAAGATA AACCGTCTGA TATCGATCTC AGTAAAGAAG ATAAATCCTC TGAAGTCGAC CTCAGCAAAG ACGATACAAC CGCTGAAGCA GTTGATAAAA GGTCAGAGGA CGAAAAAGAT AAAGATAAAT AA
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Protein sequence | MNDMAKNLIL WLVIAVVLMS LFQGFGKDDA KRSKIDYTTF VKEISGGQVQ QVQIDGEVVK GIRNNQTPFV TYIPSPDLDL LNDLIKNNVK VEGTPPEETS FLTSIFVSWF PMLLLIGVWV FFMRNMQGGG KGGAMSFGKS KAKLMGEDQI KTTFADVAGC DEAKEDVKEL VDYLKDSTKF QKLGGRIPTG VLLVGPPGTG KTLLAKAIAG EAKVPFFSIS GSDFVEMFVG VGASRVRDMF EQAKKSAPCI IFIDEIDAVG RQRGAGTGGG NDEREQTLNQ MLVELDGFEG NEGIIVVAAT NRPDVLDPAL LRPGRFDRQV VVSLPDVRGR EQILNVHMRK IPLSDDVKAN VLARGTPGFS GADLANLVNE AALFAARSNK RTVNAEDFEQ ARDKILMGAE RRSLVMTEKD KESTAYHEAG HAIVAKLVPQ HHPIHKVTII PRGRSLGVTQ FLPEGDQISQ NRTELESSIS VAYGGRIAEE LIYGLDKVST GASQDIKQAS AIARAMVTEW GFSEKLGPIL LTVDSNTLRS NLLSPETGRI IDDEVKFFID KNYQRAEKIL TDNIDILHAM KDALMKYETI DTTQVDDLMA RVVVRPPSDW TEEDSVKAEA SDKPSDIDLS KKDKPSDIDL SKEDKSSEVD LSKDDTTAEA VDKRSEDEKD KDK
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