| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0806 |
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| Symbol | prfC |
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| ID | 4626379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 1007231 |
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| End bp | 1008817 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639796005 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_942248 |
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| Protein GI | 119944568 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0794725 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00323143 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAAGTA AAGACATTAT AGAGAATGTA GAGAAGAGAA GAACATTTGC GATCATCTCT
CACCCCGATG CAGGTAAAAC AACGATCACT GAAAAAGTGT TATTATTTGG CAACGCATTA
CAAAAAGCAG GGACCGTTAA GGGTAAAAAA TCGGGTCAGC ATGCAAAATC TGATTGGATG
GAGATGGAGA AAGATCGTGG TATCTCTATC ACTACCTCGG TAATGCAGTT TCCCTATAAA
GACAGATTAG TTAATTTATT AGATACTCCC GGACATGAAG ATTTCTCGGA AGATACTTAC
CGTACTTTAA CGGCCGTTGA TTCCTGTTTA ATGGTGATTG ACGCTGCAAA AGGTGTTGAG
CAACGTACTA TTAAATTAAT GGAAGTAACC CGTTTACGTG ATACGCCGAT TATCACCTTT
ATGAATAAGT GCGATCGTGA AACACGGGAT CCGGTTGATT TAATGGATGA AGTTGAAGCT
ATCTTAAATA TTGCCTGTGC ACCTATTACT TGGCCTATTG GAATGGGCAA AGAATTTAAA
GGGATTTATG ATCTGTTACG TGATGAAGTG ATACTTTATT CATCGGGTCA GGGGCATACC
ATTCAAGAGG TGCGTATTAT TAAAGGGCTG GATAATCCAG AGCTTGAAAG TGTGCTGCCT
AACCATATTC ATGATCTGCG TGAAGAGTTA GAATTGGTTG TTGGTGCCTC GCATCAATTT
GATCATGAGC TGTTTTTAAA AGGTCAATTA ACACCGGTTT ATTTTGGTAC TGCACTGGGC
AACTTTGGTG TTGATCATGT TCTGGATGGC CTGGTTGAGT GGGCACCAAA ACCCTTATCC
CGCGCCGCAA AACAACGTGT TGTTGAGCCC CTTGAAGATG TTTTTTCCGG ATTTATTTTT
AAAATCCAAG CAAATATGGA TCCTAGACAT CGTGATAGGA TTGCCTTTAT GCGTGTTTGT
GCAGGGAAAT ATGAAAAAGG CATGAAAATG CATCATGTCC GTACGGGTAA AATGGTCAGT
ATTTCCGATG CGGTTACCTT TATGGCGGGT GACAGAACCG CCACCGAAGA GGCGTATCCC
GGTGATATTA TCGGGTTACA CAACCACGGT ACTATTCAAA TTGGTGATAC ATTTACTAGT
GGCGAAACGC TTAAATTCGC CGGTATTCCT AATTTCGCAC CGGAAATGTT CCGCCGTATT
CGTTTGCTTG ATCCGCTTAA ACAAAAACAG CTGTTGAAAG GTTTAATGCA ACTCTCTGAA
GAGGGGGCAG TACAAGTTTT CAGACCGCTG CGCAGTAATG ATTTAATCGT TGGTGCGGTC
GGTGTGCTTC AATTTGAAGT GGTTGTACAG CGTTTAAAAT CGGAATACAA AGTGGATGCT
ATTTATGAGG CGATCAGTGT TGCAACGGCT CTCTGGGTTG AAAGTGATAA CCCGTTAAAA
ATGGCCGAAT TTGAGAAAAA AGCTTACGAT AATTTAGCCT TAGACGGCAG TAATAACCTG
GCCTACATTG CACCGACTAT GGTCAATCTA AATCTTGCTA TGGAGCGCTA TCCGGATATT
CGCTTTAGAA AAACCCGCGA GCATTAA
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| Protein sequence | MTSKDIIENV EKRRTFAIIS HPDAGKTTIT EKVLLFGNAL QKAGTVKGKK SGQHAKSDWM
EMEKDRGISI TTSVMQFPYK DRLVNLLDTP GHEDFSEDTY RTLTAVDSCL MVIDAAKGVE
QRTIKLMEVT RLRDTPIITF MNKCDRETRD PVDLMDEVEA ILNIACAPIT WPIGMGKEFK
GIYDLLRDEV ILYSSGQGHT IQEVRIIKGL DNPELESVLP NHIHDLREEL ELVVGASHQF
DHELFLKGQL TPVYFGTALG NFGVDHVLDG LVEWAPKPLS RAAKQRVVEP LEDVFSGFIF
KIQANMDPRH RDRIAFMRVC AGKYEKGMKM HHVRTGKMVS ISDAVTFMAG DRTATEEAYP
GDIIGLHNHG TIQIGDTFTS GETLKFAGIP NFAPEMFRRI RLLDPLKQKQ LLKGLMQLSE
EGAVQVFRPL RSNDLIVGAV GVLQFEVVVQ RLKSEYKVDA IYEAISVATA LWVESDNPLK
MAEFEKKAYD NLALDGSNNL AYIAPTMVNL NLAMERYPDI RFRKTREH
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