Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0793 |
Symbol | |
ID | 4626366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 993740 |
End bp | 994864 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639795993 |
Product | transposase, IS4 family protein |
Protein accession | YP_942236 |
Protein GI | 119944556 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5433] Transposase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.980671 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00200934 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCCAAA TAACCTTGAT AAACCAGCTC TCAATCATCC GTGATACCCG ACAACCAAGG AAAGTGCATC ACAATTTAGT TGATGTTTTA TTTTTGGCAA TTACAGCCGT CATATCGGGC TGTGAGGGTT GGGAAGAAAT ACAAGATTTC GGCAACGATA AGTTAGATTG GCTGAGAAAG TATTTACCAT TTTCAGGCGG AATACCTACG GACGACACAA TTTCTCGTAT TTTTCAGTTG ATTGACCCAA AAGAATTTCA AAAGTGCTTT GCTACTTGGA TGAAAAGTTG CTGTGAAATG AGTCATGGAG ATGTCATTGC TATTGATGGA AAAACATTAA GAGGTTCATT TAATAAGAAA GATAAATCAG ATACTATTCA TATGGTTAGT GCTTTTGCAG CCGCTAATTC GGTTGTGCTA GGGCAAGTTA AGACAAATGC TAAGTCTAAT GAAATTACAG CGATTCCTAA GTTATTAGAT TTATTGGATG TACGTGGATG CCTCGTAACT ATTGATGCAA TGGGATGCCA AACTAAAATA GCTAAAAAAA TCGTAGATAA AGGTGGTGAT TATCTTTTGC CTGTTAAAGG TAACCAAGAA CGATTACAAA CAGCATTAGA CGGTATATTT TCAATTCGCC GATTAGAGTT ACCAGAAACA GAAGCCTATA CGACTAAAGA AAAAGGCCAT GGTCGAGAAG ATAGCAGGAT GTGTATGGTT GCAGATGCTA ACGAAATTGG TGACTTAGTT TTTGAATGGC CAGGCTTAAA AACGCTTGGG TATGCTGTCT CGTTTAGAAC TGAGAAAGAT ATGCAAACAA CTGTAGCAGT TAAGTTTTAT ATCAGTTCAG CAAAACTAGA TGCTAAGTCT CTATTAGAGG CATCAAGAGC GCATTGGACT GTGGAAAATA ACTTGCATTG GCAACTTGAT ATTTCTATGA ATGAAGACTC ATGTCGTATT CGCCAGCAGA ATTCAACAGA AAATCTAGCA ACTGTGCGAC ATACAAGCTT GAACTTGTTA AAGAATGAAA AGTCTTTCGA TGGTGGTATC AAGAGAAAGC ATAAACAAGC AAATCGCAGT GATAGTTACC GAGAACTAGT TGTTTCAGGA CTTTCGTTGT TATAA
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Protein sequence | MSQITLINQL SIIRDTRQPR KVHHNLVDVL FLAITAVISG CEGWEEIQDF GNDKLDWLRK YLPFSGGIPT DDTISRIFQL IDPKEFQKCF ATWMKSCCEM SHGDVIAIDG KTLRGSFNKK DKSDTIHMVS AFAAANSVVL GQVKTNAKSN EITAIPKLLD LLDVRGCLVT IDAMGCQTKI AKKIVDKGGD YLLPVKGNQE RLQTALDGIF SIRRLELPET EAYTTKEKGH GREDSRMCMV ADANEIGDLV FEWPGLKTLG YAVSFRTEKD MQTTVAVKFY ISSAKLDAKS LLEASRAHWT VENNLHWQLD ISMNEDSCRI RQQNSTENLA TVRHTSLNLL KNEKSFDGGI KRKHKQANRS DSYRELVVSG LSLL
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