Gene Ping_0793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0793 
Symbol 
ID4626366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp993740 
End bp994864 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content38% 
IMG OID639795993 
Producttransposase, IS4 family protein 
Protein accessionYP_942236 
Protein GI119944556 
COG category[L] Replication, recombination and repair 
COG ID[COG5433] Transposase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.980671 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00200934 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCCAAA TAACCTTGAT AAACCAGCTC TCAATCATCC GTGATACCCG ACAACCAAGG 
AAAGTGCATC ACAATTTAGT TGATGTTTTA TTTTTGGCAA TTACAGCCGT CATATCGGGC
TGTGAGGGTT GGGAAGAAAT ACAAGATTTC GGCAACGATA AGTTAGATTG GCTGAGAAAG
TATTTACCAT TTTCAGGCGG AATACCTACG GACGACACAA TTTCTCGTAT TTTTCAGTTG
ATTGACCCAA AAGAATTTCA AAAGTGCTTT GCTACTTGGA TGAAAAGTTG CTGTGAAATG
AGTCATGGAG ATGTCATTGC TATTGATGGA AAAACATTAA GAGGTTCATT TAATAAGAAA
GATAAATCAG ATACTATTCA TATGGTTAGT GCTTTTGCAG CCGCTAATTC GGTTGTGCTA
GGGCAAGTTA AGACAAATGC TAAGTCTAAT GAAATTACAG CGATTCCTAA GTTATTAGAT
TTATTGGATG TACGTGGATG CCTCGTAACT ATTGATGCAA TGGGATGCCA AACTAAAATA
GCTAAAAAAA TCGTAGATAA AGGTGGTGAT TATCTTTTGC CTGTTAAAGG TAACCAAGAA
CGATTACAAA CAGCATTAGA CGGTATATTT TCAATTCGCC GATTAGAGTT ACCAGAAACA
GAAGCCTATA CGACTAAAGA AAAAGGCCAT GGTCGAGAAG ATAGCAGGAT GTGTATGGTT
GCAGATGCTA ACGAAATTGG TGACTTAGTT TTTGAATGGC CAGGCTTAAA AACGCTTGGG
TATGCTGTCT CGTTTAGAAC TGAGAAAGAT ATGCAAACAA CTGTAGCAGT TAAGTTTTAT
ATCAGTTCAG CAAAACTAGA TGCTAAGTCT CTATTAGAGG CATCAAGAGC GCATTGGACT
GTGGAAAATA ACTTGCATTG GCAACTTGAT ATTTCTATGA ATGAAGACTC ATGTCGTATT
CGCCAGCAGA ATTCAACAGA AAATCTAGCA ACTGTGCGAC ATACAAGCTT GAACTTGTTA
AAGAATGAAA AGTCTTTCGA TGGTGGTATC AAGAGAAAGC ATAAACAAGC AAATCGCAGT
GATAGTTACC GAGAACTAGT TGTTTCAGGA CTTTCGTTGT TATAA
 
Protein sequence
MSQITLINQL SIIRDTRQPR KVHHNLVDVL FLAITAVISG CEGWEEIQDF GNDKLDWLRK 
YLPFSGGIPT DDTISRIFQL IDPKEFQKCF ATWMKSCCEM SHGDVIAIDG KTLRGSFNKK
DKSDTIHMVS AFAAANSVVL GQVKTNAKSN EITAIPKLLD LLDVRGCLVT IDAMGCQTKI
AKKIVDKGGD YLLPVKGNQE RLQTALDGIF SIRRLELPET EAYTTKEKGH GREDSRMCMV
ADANEIGDLV FEWPGLKTLG YAVSFRTEKD MQTTVAVKFY ISSAKLDAKS LLEASRAHWT
VENNLHWQLD ISMNEDSCRI RQQNSTENLA TVRHTSLNLL KNEKSFDGGI KRKHKQANRS
DSYRELVVSG LSLL