Gene Ping_0777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0777 
Symbol 
ID4626518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp976582 
End bp977598 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content40% 
IMG OID639795980 
ProductdNTP-hexose dehydratase/epimerase 
Protein accessionYP_942223 
Protein GI119944543 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1088] dTDP-D-glucose 4,6-dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.955272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0951081 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTAT TAATCACTGG CGGATGTGGT TTTTTAGGCA GTAATTTAGC CTCTCATGGT 
ATCAAAAAAG GCTATGAAGT GACGGTTTTT GATAATTTAT CCCGATTAGG TACGACAGAC
AATCTGGCAT GGTTAAAAAC CTTTGGTGAA TTTGAGTTTG TGCATGGTGA TATTCGTAAT
AAGAACGATG TAACCCGCTT AATTGAGCGT GTAAAACCGG ATGCTATGTT TCATCTTGCT
GGTCAGGTCG CGATGACAAC GTCACTTGAA AATCCATATA TGGATTTTGA AGTTAATATT
GGTGGTTCAA TCAATGTACT TGAAGCAGTG CGTCTCTATT CACCTGAGAC TGCAATTTTT
TATTCATCAA CGAATAAAGT CTATGGCGAT TTAGAGCAGT TTGAGTATGA AGAAACAGCC
ACTCGTTATC AGTGTGTGGA TTTGCCTGCA GGTTTTGATG AGAAAGTGGG ATTAGATTTT
CACTCTCCTT ACGGCTGTTC AAAAGGCTCC GCTGATCAGT ACATGCTTGA TTATGCAAGA
TTGTTTGGTT TGAACACTAC TGTGTTTAGA CATTCATCAA TGTATGGCGG ACGTCAATTT
GCTACCTATG ACCAAGGTTG GGTAGGCTGG TTCTGCCAAA AAGCACTTGA TGCAAAAGCA
AATCCAGATG TCGCCCCATT CACGATTTCT GGAACAGGCA AACAGGTTCG TGATGTATTG
CATGCAGAAG ATATGATTTC ACTTTATTAT TCTTCATTAG ATAACAAAGA AAAAGTATCG
GGTAAAGCAT TTAACGTTGG CGGCGGTATT GATAACAGCT TATCGTTATT AGAGTTGTTC
TCCCTATTAG AAAGCATTAC GGGATGTAAG TTAAGTTATG AAAAACTACC TGTTCGCTCT
AGCGACCAAC GGGTCTTTGT TGCTGATTCT ACAAAATTAG AGTCGTTAAC TGGCTGGAAG
CCTAAAGTAA GCAAAGAAGA TGGTGTTGGG CGAATGATCG AGTGGCTGAG TCAGTAA
 
Protein sequence
MKLLITGGCG FLGSNLASHG IKKGYEVTVF DNLSRLGTTD NLAWLKTFGE FEFVHGDIRN 
KNDVTRLIER VKPDAMFHLA GQVAMTTSLE NPYMDFEVNI GGSINVLEAV RLYSPETAIF
YSSTNKVYGD LEQFEYEETA TRYQCVDLPA GFDEKVGLDF HSPYGCSKGS ADQYMLDYAR
LFGLNTTVFR HSSMYGGRQF ATYDQGWVGW FCQKALDAKA NPDVAPFTIS GTGKQVRDVL
HAEDMISLYY SSLDNKEKVS GKAFNVGGGI DNSLSLLELF SLLESITGCK LSYEKLPVRS
SDQRVFVADS TKLESLTGWK PKVSKEDGVG RMIEWLSQ