Gene Ping_0748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0748 
Symbol 
ID4623666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp943773 
End bp944549 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content43% 
IMG OID639795952 
ProductNa(+)-translocating NADH-quinone reductase subunit C 
Protein accessionYP_942199 
Protein GI119944519 
COG category[C] Energy production and conversion 
COG ID[COG2869] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC 
TIGRFAM ID[TIGR01938] NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00248984 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAATA AAGAATCATT CGGTAAAACG ATCGGGGTTG TGCTGGCGGT ATGTCTGGTC 
TGTTCAATCA TTGTTGCAGG CTCTGCTGTT GGTCTTCGCG ACTTGCAATT AGCAAATAAA
GCGAAAGATA AACAGAACAA TATTCTTGCT GTCGCCGGCT TACAAACGGA TAAAACCAAT
AAAGAAATAT TTTCTTCTAA TATAGTGACG CGTTTAGTTG ATTTAGACAG TGGAAATTTT
GCTGAAGGTG TTGATCCTGA AAATTATGAT CAACGTAAAG CATCAAAAGA TCTGCAGCGC
AGTATCAAGC TCACTGGAAA AGAGAATGTT GCAAGCATTG GCCGCCGGGC TAATTTAGCC
ACTGTCTACC TTGTGTCAGA TAATCAGGGT AAATTGCAGC GTGTTATTCT GCCTGTCCAT
GGTGCAGGTT TATGGTCAAC CATGTATGCC TTTGTTGCTG TAGAAACAGA CGGTAATACT
ATTGCTGGCA TCACTTATTA TGAACAGGGT GAAACGCCGG GATTAGGCGG GGAAGTTGAA
AATCCGCGCT GGGTCAAACT TTGGCCGGGA AAAGAGCTAT TTGATGCTCA GTGGAACCCT
GCGATTCAAG TGGTAAAAGG AGAAGTTGCG CCCGATTCCA AGCATAAAAT TGATGCTTTG
TCAGGGGCAA CATTAACCAG TGCTGGTGTT CAAAATACTT TTACTTTTTG GTTCGGAGAG
CAGGGCTTTG GTCCATTTCT TAAAAAATTT CGCCAAGGAG CGCTAACAAA TGGCTAA
 
Protein sequence
MSNKESFGKT IGVVLAVCLV CSIIVAGSAV GLRDLQLANK AKDKQNNILA VAGLQTDKTN 
KEIFSSNIVT RLVDLDSGNF AEGVDPENYD QRKASKDLQR SIKLTGKENV ASIGRRANLA
TVYLVSDNQG KLQRVILPVH GAGLWSTMYA FVAVETDGNT IAGITYYEQG ETPGLGGEVE
NPRWVKLWPG KELFDAQWNP AIQVVKGEVA PDSKHKIDAL SGATLTSAGV QNTFTFWFGE
QGFGPFLKKF RQGALTNG