Gene Ping_0743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0743 
Symbol 
ID4623661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp937255 
End bp939513 
Gene Length2259 bp 
Protein Length752 aa 
Translation table11 
GC content41% 
IMG OID639795947 
ProductATP-dependent Clp protease, ATP-binding subunit clpA 
Protein accessionYP_942194 
Protein GI119944514 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0542] ATPases with chaperone activity, ATP-binding subunit 
TIGRFAM ID[TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGACA AAGCGTTGGA AAACAGTTTA GATTTGGCTT TTCGTATTGC CTTTGAAAAA 
TCGCATGAAT TTATGACGGT TGAGCATTTA TTATTAGCAT TATTAGAAAA TGACGAAATT
AAAAATTTAT TTACCGCTTG CTCGGTGGAT ATTGTCTCTT TGCATTTAGA GATTATTACG
TTTTTAGAAA AAAGCCCTGC GATACCCGAA GTGCATACTC AGGAGGTTGA AATTCAGCCA
ACCATCGCTT TTGAGCGTGT CTTGCAGCGG GCTATTTTTC ATGTGCAATC TTCCGGATCG
AAGGAAGTTT CAGCTGGCAG TGTATTAGTG GCTATTTTTA GTGAACAAGA ATCTCAAGCT
GTTTATCTTT TAAAAAAAGC CCACCTGTCC CGTTTAGATG TTGTTAATTA TCTGTCACAC
GGAATCACTA ACGCCGCGGA GTCTATTATT CCTATTTTCC GCGCAGAAGA ACAGGGTGAT
ACAAAAGAGC AAGATCCGGA GAAGATGGCC TATACGATTA ACTTAAATAA ACAAGTTGAA
GCGGGGGAAA TTGATCCGTT AATAGGTCGA GATAAAGAGC TTGAACGTTG TATACAAGTG
TTATGCCGCC GCCGTAAAAA CAACCCATTA TTGGTTGGGG AAGCAGGGGT TGGGAAAACC
GCCATTGCTG AAGGACTCGC TTACCGCATT GTGCATGAAA AGGTACCGGA AGTTATTGCC
GATAATATTG TTTATTCGTT AGACATGGGC GCCTTGCTCG CAGGTACAAA ATACCGGGGC
GAGTTTGAGT TGCGTTTTAA AACAGTATTA GCACAACTTG AGTCCCAGGA AGGGGCTATT
TTATTTATCG ATGAAATTCA TACTATTATA GGTGCCGGTG CTGCAACGGG CGGACAACTT
GATGCCGCAA ATTTGTTAAA ACCTTTACTT AGTGGTGGCA AACTTCGTTG TATGGGATCA
ACAACGTATA AAGAGTTTGG GCAAATTTTT GAAAAAGAAC ATGCATTATC ACGGCGTTTT
CAAAAAATTG ATGTACTCGA GCCTACTATT CAAGAAACGG CGCAAATATT ACTCGGATTA
AGATCCCGTT ACGAGAAACA TCATCATATT CTCTATACTA ATGAAGCGCT GATGGCCGCT
GCAGAACTCA GTGCGAAATA TATTAATGAT CGCCATCTCC CGGATAAAGC CATTGATGTA
ATTGATGAGG CTGGGGCGCA AATGCGTTTA TTACCCGCCG GTAAACGTAA AAAAACAGTG
GGTGTAACTG ACATTGAAAG CGTGATTGCC AAAATTGCAC GCATTCCGGA ACAATCAGTG
TCCAGTTCGG CAAAAGAACA ATTAGCTAAA TTACCAGAAC GTTTGAAAAT GACGGTGTTT
GGTCAAAATC AGGCGATTGA TGTATTAACC GATGCCATTC ATTTAAATCG CTCCGGATTA
TCCGATGAGT CAAAACCAAT AGGCTCATTT CTGTTTGCAG GTCCTACGGG TGTCGGTAAA
ACTGAAGTGA CACAACAACT TGCTAAGGCT ATGGGAATAG AACTTTTACG TTTCGATATG
TCAGAATACA TGGAAAAGCA TACGGTTTCG CGCCTGTTAG GAGCACCTCC TGGTTATGTT
GGTTATGAAC AGGCGGGGTT ATTAACCGAT GCGGTTGTTA AACACCCTTA TGCAGTATTG
TTGCTCGATG AAATAGAAAA AGCACACAGT GATATATTCA ATATATTACT ACAAGTCATG
GATCACGGGA CGTTAACCGA CAGTAATGGT CGTAAAGCTG ACTTTAGGAA TATTATTTTA
GTGATGACAA CCAATGCCGG CGCGCGAGAA ACCGCTAAAC AGAGCATCGG GTTTAAAGAT
CAAAAAGATT CGCACAAAGC GACGGATGAA ATAAATAAAT TATTTTCACC TGAATTTAGA
AATCGTCTTG ATAATATTAT TTGGTTTAAC CATCTTGAAA TAGAGATCAT TTATCAAGTG
GTCGATAAAT TTATTGTGCA GTTACAAGCA CAGCTTGATA AAAAGCAGAT TTCATTGGAA
GTCAGCGACA GTGCTAGAAA ATGGATAGCG GATCATGGTT ATGATAGGAC GATGGGAGCA
CGGCCGATGG GGCGTTTGAT CCAAGAAAAG TTGAAAAAAC CATTAGCCAA TGAGATTTTA
TTTGGTGAAC TGCAACAGGG TGGAAGCGTG ACTGTCTCGT TAGATAAAGA TGGTCAGGAC
ATTAGTTTCA GTTATGCACA AACCCTCGCG CTAACATAA
 
Protein sequence
MLDKALENSL DLAFRIAFEK SHEFMTVEHL LLALLENDEI KNLFTACSVD IVSLHLEIIT 
FLEKSPAIPE VHTQEVEIQP TIAFERVLQR AIFHVQSSGS KEVSAGSVLV AIFSEQESQA
VYLLKKAHLS RLDVVNYLSH GITNAAESII PIFRAEEQGD TKEQDPEKMA YTINLNKQVE
AGEIDPLIGR DKELERCIQV LCRRRKNNPL LVGEAGVGKT AIAEGLAYRI VHEKVPEVIA
DNIVYSLDMG ALLAGTKYRG EFELRFKTVL AQLESQEGAI LFIDEIHTII GAGAATGGQL
DAANLLKPLL SGGKLRCMGS TTYKEFGQIF EKEHALSRRF QKIDVLEPTI QETAQILLGL
RSRYEKHHHI LYTNEALMAA AELSAKYIND RHLPDKAIDV IDEAGAQMRL LPAGKRKKTV
GVTDIESVIA KIARIPEQSV SSSAKEQLAK LPERLKMTVF GQNQAIDVLT DAIHLNRSGL
SDESKPIGSF LFAGPTGVGK TEVTQQLAKA MGIELLRFDM SEYMEKHTVS RLLGAPPGYV
GYEQAGLLTD AVVKHPYAVL LLDEIEKAHS DIFNILLQVM DHGTLTDSNG RKADFRNIIL
VMTTNAGARE TAKQSIGFKD QKDSHKATDE INKLFSPEFR NRLDNIIWFN HLEIEIIYQV
VDKFIVQLQA QLDKKQISLE VSDSARKWIA DHGYDRTMGA RPMGRLIQEK LKKPLANEIL
FGELQQGGSV TVSLDKDGQD ISFSYAQTLA LT