| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0727 |
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| Symbol | |
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| ID | 4624919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 919905 |
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| End bp | 921218 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639795926 |
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| Product | TolB domain-containing protein |
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| Protein accession | YP_942178 |
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| Protein GI | 119944498 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.162759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTTAC GTTTATTTTT ATCAATTTCA ATGATTATAT TGTCGTCTCA GGCTTCTGCC
CGCTTAGAAA TTTTAATTAC CGAAGGGGTT AATACTGCTA GGCCGATCGC TGTTATTCCA
TTTAAGTGGT TAGGTGATGG CGAAAAACCG GGAAATTTTT CAGAGATTAT CGCTGCAGAT
TTACAACGTA GTGGTCAATT TAGTCCCCTT CCTATTGAGC AAATGCCTAA TACTCCGTCA
AAGAGTCTCG GCCTTGATTA TGCCCTGTGG CATAAAATGG GGATTGAAGC TTTATTGATG
GGGGAAGTCT CACCTTCACC GGAAGCCGGG AAATATATTG TTACCTATGA ATTGGTAGAC
GTTGTGGCGG GAAATGCAAA TATTGCTGAC TACAGTCCTA TTTTAGAAAG TCGCCGTGGC
ACCGTAAATA AAACTCAATT ACGTCGCTTT GCACATCGTA TTAGTGATGT TGCCTATGAA
AAATTAACGG GTGAAAAAGG CGTATTTTTA ACCCGGATTG CCTATATTGC AGTGGATCGC
AAAAGTGACT ATCCCTACCA ATTACGTATT TCTGATTATG ACGGTTATAA CGAAAAATTA
ATACTGCGTT CAAAACAGCC TATTATGTCA CCAACATGGT CTCCGGATGG AAGAAAATTG
GCCTATGTTA GCTTTGAGCA CCGCCGTTCA GAAGTCTATA TACAAGATTT ATATAGCCAA
AAACGTGAGT TAATGACCTC TTTTCCAAAA ATAAATGGCT CACCCAGTTG GTCCCCAGAC
GGTAAATCTT TGGCAATAGT ATTATCAAAA GACGGGCAGC CCGAGATCTA CACCTTAGAA
ATACAAAGCA AAGCGTTACG TAGAATCACT AATAATCGCG CTATAGATAC CGAACCTAAT
TGGTCGCCAG ACGGCAATAG TTTAACTTTT ACTTCTACTC GCGGTGGAGG GCCTCAAATT
TATCAAGTTG ATCTTCAATC GAAAGTGACA AAACGGCTTA CCTGGGAAGG TGATCTTAAT
TTAGGTGGTG CAATTACCCC CGATGGTGCT AATCTAGTGC TCGTTAGCCG CCTTGATGGT
AATTATAAAA TAGCCGCACA AGATCTGGCC TCTGGCGAAC TAAGAACCTT GACCAAAACA
CATTTAGACG AGTCACCAAG CGTTGCGCCG AATGGCAGTA TGATAATTTA CAGTACTGTT
TATAAAGGTA GTCAAGGTCT GGCGTTAGTC TCTATGGACG GTCGTTTTAA AGCGAATATT
CCTGCACAAA GTGGCGAGGT TAAATCGCCT GCGTGGTCTC CATTTTTAAA GTAA
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| Protein sequence | MLLRLFLSIS MIILSSQASA RLEILITEGV NTARPIAVIP FKWLGDGEKP GNFSEIIAAD
LQRSGQFSPL PIEQMPNTPS KSLGLDYALW HKMGIEALLM GEVSPSPEAG KYIVTYELVD
VVAGNANIAD YSPILESRRG TVNKTQLRRF AHRISDVAYE KLTGEKGVFL TRIAYIAVDR
KSDYPYQLRI SDYDGYNEKL ILRSKQPIMS PTWSPDGRKL AYVSFEHRRS EVYIQDLYSQ
KRELMTSFPK INGSPSWSPD GKSLAIVLSK DGQPEIYTLE IQSKALRRIT NNRAIDTEPN
WSPDGNSLTF TSTRGGGPQI YQVDLQSKVT KRLTWEGDLN LGGAITPDGA NLVLVSRLDG
NYKIAAQDLA SGELRTLTKT HLDESPSVAP NGSMIIYSTV YKGSQGLALV SMDGRFKANI
PAQSGEVKSP AWSPFLK
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