| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0724 |
|---|
| Symbol | |
|---|
| ID | 4625071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 917850 |
|---|
| End bp | 918533 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639795923 |
|---|
| Product | MotA/TolQ/ExbB proton channel |
|---|
| Protein accession | YP_942175 |
|---|
| Protein GI | 119944495 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0811] Biopolymer transport proteins |
|---|
| TIGRFAM ID | [TIGR02796] TolQ protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.49682 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCATGCTG ATATGTCTTT TTTAGGTCTG TTTTTACAAG CTAGTTGGCT TGTGAAATTT
GTATTAATTC TTTTGCTTGG AATGTCCATT TATTCCTGGA CATTGATTTT CTCCCGAACA
AAAAATCTTA AATCGTCAGA AAAAGCACTG AAACTTTTTG AAGAGCGTTT CTGGTCGGGT
CATGATTTAA GCCGTTTATA CAAAGAATCG GCTGCCCGTA GTGAGCGAAT TACAGGTGGT
GAAAAAATAT TTCATGGCGG TTTTAAGGAG TTTTCACGTT TACATCGGAT TCCAGGGCGC
ACTGTCGACA GTACGACTGA AGGTGCTCAT CGTATTATGC GTGTTACTTT ATCAAGGGAA
ATTGATGAGT TAGAAACGGG TCTTCCTGTT TTAGCGACAA TAGGCTCTAT TAGTCCCTAT
ATTGGATTAT TTGGTACAGT ATGGGGGATT ATGAACTCCT TTATTGCATT AGGAGAAGTG
CAGCAAGCCA CTTTGACTAT GGTCGCCCCG GGTATTGCTG AAGCGTTAAT CGCCACTGCG
ATGGGGTTAT TTGCAGCGAT TCCTGCTGTT ATGGCATATA ATCGTTTTTC GACACAAGTG
GGTAAATTAG AAACGGCATA TATTAACTTA ATGGAAGAAT TCACCTCCAT TTTACACCGT
CAGTCAACGA CTGAAAGTGA CTAG
|
|---|
| Protein sequence | MHADMSFLGL FLQASWLVKF VLILLLGMSI YSWTLIFSRT KNLKSSEKAL KLFEERFWSG
HDLSRLYKES AARSERITGG EKIFHGGFKE FSRLHRIPGR TVDSTTEGAH RIMRVTLSRE
IDELETGLPV LATIGSISPY IGLFGTVWGI MNSFIALGEV QQATLTMVAP GIAEALIATA
MGLFAAIPAV MAYNRFSTQV GKLETAYINL MEEFTSILHR QSTTESD
|
|---|
| |