| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0723 |
|---|
| Symbol | |
|---|
| ID | 4625070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 917408 |
|---|
| End bp | 917860 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 639795922 |
|---|
| Product | 4-hydroxybenzoyl-CoA thioesterase |
|---|
| Protein accession | YP_942174 |
|---|
| Protein GI | 119944494 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0824] Predicted thioesterase |
|---|
| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTATTTA TAGTAGTTTT AGCTTTTATT ATTTTTTGGA AAAACTGTGT ATTCATGTCA
ACTTTAGCCG TACGAATTTA TTATGAAGAC ACCGATGCCG GTGGTGTTGT TTATTACGCA
AATTATCTGA AATTTTTTGA GCGCGGGCGT ACTGAATTTT TACGTGAGCT TGACATCCAA
CAAGACACAT TATTGGATAA AAATATTGCA TTTGTAGTGC GTAAAGTGGA GATGGATTGT
CTTAAACCTG CCCGTTTTAA TGCGTTACTG AGCGTGAAAA CACAAATAAC CGGTCACAAA
AAAGCTAGCT TAATATTTCA ACAAGAAGTT TTTCATGAAA ACGGGGAACT TCTATGCCAA
GCTAGCACTC TAATCGCCTG TGTTAATTTA CAGAAAATGA AACCCGCAGC TATTCCGGCT
GAAATTATTG AGGTAATCGC CAGTGCATGC TGA
|
|---|
| Protein sequence | MVFIVVLAFI IFWKNCVFMS TLAVRIYYED TDAGGVVYYA NYLKFFERGR TEFLRELDIQ
QDTLLDKNIA FVVRKVEMDC LKPARFNALL SVKTQITGHK KASLIFQQEV FHENGELLCQ
ASTLIACVNL QKMKPAAIPA EIIEVIASAC
|
|---|
| |