Gene Ping_0717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0717 
Symbol 
ID4625064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp910762 
End bp911646 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content38% 
IMG OID639795916 
Producttransporter DMT superfamily protein 
Protein accessionYP_942168 
Protein GI119944488 
COG category[R] General function prediction only 
COG ID[COG2962] Predicted permeases 
TIGRFAM ID[TIGR00688] rarD protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.424655 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.726711 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGATC TTTCTCAAAC GCAGCTTGGT ATTGTCTATG CGCTTAGTGC CTATCTCCTG 
TGGGGAATTA ACCCCATCTT TTTTAAGTAT CTTGGGTTTA TTCCTGTTTA TGAAATACTC
GCGCATCGGG TGATCTGGTC GGTGGTGTTT ATCGCCATTG TTATCACTTT TCTGGGGGGA
TGGGGAAAAG CGCTGAGTAT CCTTAAAACA CCTAAAAACA TTTTATTTTT AACCTGTACG
AGTCTCTTAA TTTCGGTCAA TTGGAGCGTT TTTATTTGGG CGATAAATAA TGGACGTATG
TTAGAGGCAA GTTTAGGGTA TTTTATTAAC CCGCTTATTA ATGTTGTTTT GGGTTTGGTT
TTCCTGAATG AAGCCTTAAG CAGAGTCAAA TGGATTGCTG TCTCATTAGC CCTGATCGGT
GTGCTTATTC AGGTTGTACA GGTAGGCAGT TTACCCTGGG TTTCTTTAGT ATTGCCCATT
AGTTTTGGGT TTTATGGTTT ATTGCGTAAA AAAATTAAAA TTGAAGCCCT AATTGGCTTG
TTTTTTGAAA CCTTATTAGT GTTACCCGTG GCATTATATT ACCTGTTTTT TGTCGCTAAC
GGTGAAAACG TGAATATGCT TAATAATAAT TGGTCGTTAA ATCTTTGGTT AATGTTTACC
GGTATTGCGA CCGCGATGCC GCTTTTCTTT TTCGCACAAG CGGCATTACG TTTAAAACTG
TCAACTCTGG GATTTTTCCA ATATCTTGCC CCCTCAATGA TGTTTCTGAT GGCAGTGTTT
ATCTATGGTG AAGTATTAAG TTTGGCGAGA ATCATCACTT TTATCTTTAT CTGGGCGGGT
ATCTTGTTAT TTGCTGGTGA GAATAAGCTT AAAAAGTGGT TATAA
 
Protein sequence
MKDLSQTQLG IVYALSAYLL WGINPIFFKY LGFIPVYEIL AHRVIWSVVF IAIVITFLGG 
WGKALSILKT PKNILFLTCT SLLISVNWSV FIWAINNGRM LEASLGYFIN PLINVVLGLV
FLNEALSRVK WIAVSLALIG VLIQVVQVGS LPWVSLVLPI SFGFYGLLRK KIKIEALIGL
FFETLLVLPV ALYYLFFVAN GENVNMLNNN WSLNLWLMFT GIATAMPLFF FAQAALRLKL
STLGFFQYLA PSMMFLMAVF IYGEVLSLAR IITFIFIWAG ILLFAGENKL KKWL