Gene Ping_0701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0701 
Symbol 
ID4627032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp892316 
End bp893014 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content40% 
IMG OID639795900 
Producthypothetical protein 
Protein accessionYP_942152 
Protein GI119944472 
COG category[S] Function unknown 
COG ID[COG4902] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.773416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAA TATTGATCAG TGTTATTTTT ATATTAATTG CTCTTTTGGG GGCTAATACT 
TTGGTTGCAA AATATTATGG AGCAGAGGCA GAAAAAGTGC TTGTACCTCC ATTAGTCGCG
CTCGATGTTG TAGAAGTATC CCATTTGACC TTTATGCGCG AAGAAGAAAA ATTCGCACGT
GATGTTTACT TAACTTTGGC AGAGCAATAT CCACAGCAAA AAATTTTTAA GCTTATAGCG
ACGGGTGCAG AGCAAATTCA TACTGATATG ATGCGTGATA AACTGGAGAT GTTTAATGTG
CCAGATCCAA ATCCTAATAG CGATAATTTG TCCGATATTA TCGGTGTTTT TGCTGGAGCG
GAATGGGGCT GGTACTTTAC TGAACAGTAT CAGTTTTTAA TAGATCAAGG CATGATCAGC
GAGCTTGAAG CCTTATACGT CGCGGCTTAT ATTGAAGAGC TAAACATAAA AGATATTGCG
CTGTGTCCAG ACGTAATGAT TGATAATGGA TATCCCTCTC CATGCGGTTT AGCCTATACC
ACTCAAAAAG CCTTACAAAC CGCATATAAC ACATTACTTA GCGGATCAGA AAATCACCTG
CGCGCTTTTG TGAGGCGGAT CGAGGCGGTG ATTGGAGAGG GTGATTATGA GGCTCAATAT
CTAACTCAAG CTGAAATGGA TACCATTCTA GGCCGTTGA
 
Protein sequence
MNKILISVIF ILIALLGANT LVAKYYGAEA EKVLVPPLVA LDVVEVSHLT FMREEEKFAR 
DVYLTLAEQY PQQKIFKLIA TGAEQIHTDM MRDKLEMFNV PDPNPNSDNL SDIIGVFAGA
EWGWYFTEQY QFLIDQGMIS ELEALYVAAY IEELNIKDIA LCPDVMIDNG YPSPCGLAYT
TQKALQTAYN TLLSGSENHL RAFVRRIEAV IGEGDYEAQY LTQAEMDTIL GR