| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0686 |
|---|
| Symbol | |
|---|
| ID | 4626483 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 872651 |
|---|
| End bp | 873823 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639795886 |
|---|
| Product | peptidase M50 |
|---|
| Protein accession | YP_942138 |
|---|
| Protein GI | 119944458 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1994] Zn-dependent proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.393797 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTGTTAT TCAATGAAGG CATAATATGG CTATCTTCAA CAAACGGGAA GCGCATAGTG
GAATTGCTAC AACTTGAACA TTTTGGAAAA ACATTAAGGC TCGAGGGCTC CCTTGCCGGG
TGGCAAGAGC TGTATTGGGG GGATAATTTA GTCTCGCAGT TAAGTGCAAC AGAAAATCTA
GACGCAAAAT CGAGTCATCA TTTTGAGCTG CATAATAACG TGCCTCGGGC AGTCGAGCCT
GAAGAGCAGG CGCAACCGGC AATGCAATGT CAGCTCGCTA TTGATTTAAC TTGGCAGCCC
TTTACTATTG AGTATCAGTT AATGATAGAT GGTCGTATCA TTGATCAAGG CAGCCGTAAC
AGTAAAGATA TCGAGCAGCA AGTCCCGATA AAAAAGCCGC AGATTAAAAA GAAATTTAGC
ACTGTGGGAC TGCTCTCATT GGGTCTTAAA TTATTTAAAA GTGCCAAATT ATTTAAAGTG
ATCCTTGCTG GTGCGAGCTT GGCCGCCTAT AGCTGGTTTT TCTCCTGGCA ATTTGCGCTG
TCATTAATCG CTTGCCTGGT TTTTCATGAG TACGGCCATA TTCGTGCTAT GCAGTATTTT
TCTATGAAAA CCAAGGGTAT TTACCTGATC CCTTTTTTTG GGGGACTGGC TGTTAGCGAT
GATAAAATTA ATACACGCTG GCAAAATGTG GTTATTTCCA TTATGGGGCC AACCTTTGGT
TTATTCCTGT CGATTGCCTG TCTGCTGCTT TATTGGTCTA CCGATATTAC TTTTTTTGCC
GGACTGGCTG TTTTTAACAG TCTTTTAAAT CTTTTTAACT TGCTGCCAAT TTTACCGCTG
GATGGTGGGC ATATTCTAAA AAGTATTAGC TTTTCAATCA ATAGTAAGCT TGGATTAGTT
GCTTGTATGC TAGCCGCTGC GCTGGGTGTA TTCATCAGCT ATAGTTTAGG ATTAGCCTTA
TTAGGCTTTT TGCTAATAAT TGGCAGTGTC GAAATTATTA TGGAGTGGCG TGGTCGTCAT
CAAAGTCATC TGCTTCCACT GGATCGTTAC GGGCAAATTT TTTCAACAGT GTGGTATCTG
TTAACCGTTG GCATTTTGGT GGCTATTATT ATGTATTTTG CAGATTCGCC TGAAGAGATC
CTGGCATTAC CAATGAAGAT CTTAGGGAGT TAG
|
|---|
| Protein sequence | MLLFNEGIIW LSSTNGKRIV ELLQLEHFGK TLRLEGSLAG WQELYWGDNL VSQLSATENL
DAKSSHHFEL HNNVPRAVEP EEQAQPAMQC QLAIDLTWQP FTIEYQLMID GRIIDQGSRN
SKDIEQQVPI KKPQIKKKFS TVGLLSLGLK LFKSAKLFKV ILAGASLAAY SWFFSWQFAL
SLIACLVFHE YGHIRAMQYF SMKTKGIYLI PFFGGLAVSD DKINTRWQNV VISIMGPTFG
LFLSIACLLL YWSTDITFFA GLAVFNSLLN LFNLLPILPL DGGHILKSIS FSINSKLGLV
ACMLAAALGV FISYSLGLAL LGFLLIIGSV EIIMEWRGRH QSHLLPLDRY GQIFSTVWYL
LTVGILVAII MYFADSPEEI LALPMKILGS
|
|---|
| |