| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0679 |
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| Symbol | |
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| ID | 4626476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 866956 |
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| End bp | 867501 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639795879 |
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| Product | type IV pilin |
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| Protein accession | YP_942131 |
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| Protein GI | 119944451 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.639618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGATCAAAA TGGATGCTGT TGAAAGGTTT TATATGGAAA TTAAACATAA CAATAATCGT
GGCTTTACAT TCATTGAGTT ATTGGCTTCT CTAACGGTAA TCATGATTCT GGTAGCAGCT
GGCATCAGTA ATTACGGGGC TCTCTTTGCA CAGCAGACTT TAATACAAAA AACTGAACAT
CTTTATCACT TTTTGCGTTT AGCGCAGACT CAGGCTATTA AAGGTAATCG ACAGATTTAT
GTACATTTTT GCCAGGCCAC AAATTCTAAT AGTTGGAAAA TGGCGATGTC AAATAGTCCT
GTCGCTGATT CATGTTCGTT AAACGGTCAT AATAAAGTGG AACAGTTAGC CGACGGTAAA
AAGCTGTTTG CTGCGACAAA TTTTGGCAGT AACCAAGCCT CCTACCAGCC GATGCGATTT
GACACTAATC TCGGTAATGT GACCTTGAGT AATAGTAACG GGGACTCATT AAAAGTGATC
CAGTCAAGAA TACGTTTAAG AATATGTTCT CCGGACAGCG CTCGATTAGG ATATGAACAA
TGTTAA
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| Protein sequence | MIKMDAVERF YMEIKHNNNR GFTFIELLAS LTVIMILVAA GISNYGALFA QQTLIQKTEH
LYHFLRLAQT QAIKGNRQIY VHFCQATNSN SWKMAMSNSP VADSCSLNGH NKVEQLADGK
KLFAATNFGS NQASYQPMRF DTNLGNVTLS NSNGDSLKVI QSRIRLRICS PDSARLGYEQ
C
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