Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0676 |
Symbol | |
ID | 4626473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 863798 |
End bp | 864655 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639795876 |
Product | peptidase M23B |
Protein accession | YP_942128 |
Protein GI | 119944448 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.208838 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGAATTT TAGCTTTTCT GTTAGTCACT TTAGGTTTAA GTGGTTGCTC ATCTTCATAT GGCCCTGTTC CTGTTTCCGA TGTAACGGGG AGCACTCGCT ATCAAACCGT TAAGCAGCAA ACATCGGGAA TAACTGCTAA AAGTTATCAA GTGCAAAAAG GTGATACTTT ATTTTCTATT TCCTGGCGGG CGAATATTAA TGTTAATGAT TTGGCGAACT ACAATCAATT ATCTGCACCC TATCTTATTA AGGAAGGACA AACTTTACAT TTAAGCGCAG CCAAGAAGAG AAATACCATT TCTGTTAAAA AGCCAGCAGT AAAAAGAAAG CCTCCCCCAA TAAAAGACAA AAAAATATCA AACACAGATC AAGTTTATAG CAAAGAAAGT CAACCTGCTA TTGTACAAAA AAATCCAATC ACCTATTCTT CCTCTACGAG AAAAACCGAT GTAAAAATAA CTAAGCCTAA AAAATTAAAT GTTAAAATAA GCCATTGGCA ATGGCCCGCA AAAGGAAAAT TGACAAAAAC TTTTGCTTCC TCTGAAACAG GAATGAAAGG GCTCAGTCTC TCAAATCAGC GTGGAACGCC TATCTACACG GCAGCGTCCG GTGAGGTTGT TTACGCAGGT GCGGGTCTTC GTGGTTTTGG TAATTTAATT ATCATCAAAC ATAATGATGA TTATTTAAGT GCTTATGCAC ATAATGAGCA GCTACTAATA AGCGAAAAAC AACAGGTAAA AGCAGGCCAA AAAATAGCAA CAATGGGTGA TAGTGGTACA GATAGTGTGA AACTGCACTT TGAAATCCGT TATCAAGGAA AGTCTATCGA TCCCATGCGT TATTTACCTA AACGCTAA
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Protein sequence | MRILAFLLVT LGLSGCSSSY GPVPVSDVTG STRYQTVKQQ TSGITAKSYQ VQKGDTLFSI SWRANINVND LANYNQLSAP YLIKEGQTLH LSAAKKRNTI SVKKPAVKRK PPPIKDKKIS NTDQVYSKES QPAIVQKNPI TYSSSTRKTD VKITKPKKLN VKISHWQWPA KGKLTKTFAS SETGMKGLSL SNQRGTPIYT AASGEVVYAG AGLRGFGNLI IIKHNDDYLS AYAHNEQLLI SEKQQVKAGQ KIATMGDSGT DSVKLHFEIR YQGKSIDPMR YLPKR
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