| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0666 |
|---|
| Symbol | |
|---|
| ID | 4626903 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 854481 |
|---|
| End bp | 855455 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 639795866 |
|---|
| Product | porin |
|---|
| Protein accession | YP_942118 |
|---|
| Protein GI | 119944438 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3203] Outer membrane protein (porin) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00111405 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA CATTACTAGC AGTCGCAATC CCAGCACTTT TATTCGCCAA CGCAAGTTCA
GCGGTTGAAT TATACAACGA TGCAGCTAAT ACTTTTTCTA TCGGCGGCCA TGTTGCAATG
GGTTTAGCTG GATCAGATGA AGGCGAAACT CAGGTAGCTT CAGTATCACC GCGTATCAAT
TTTGAAGCTA CTCGTGATTT AGGCGAAGGT TACACTATGT TTCTTCGCAC TGAGTGGTCA
GTAAATACAT TAGACGGCGG AGCAAACTCA TTTTCCACAC GTTTAGGTTA CCTTGGGCTT
AGCCATGCAG ACAACGGTAC TGCTATCATC GGTACACAAT GGTCTCCATA CTACAGTGTT
GGTGGCGTTG CAGATTTACC TGTTGCATTC GCTAACGGAT CTTTATACAG CGACCACTAT
AATCTTGGTA CAGGACGTGC TGAAAGAATG GTCAGTTACA GCAATAAACT AGATTTAGGC
ACTGCAGGCG CGCTTAAATT AGGTCTAGGT TGGCAGGGTA AGCACGCTGC ATATGATACT
CGTGTGCAAG CGGCATTAAC CTACTCAGTA ATGGACGTAA CTCTAGGTTA TGCACACAAC
ACCGGTGATG TTGCTGCAGA CAAAGCTGTT TCAAATATTG TTTCAGCAAA ATATGGTTCT
TACGGTAACG GATTATATGC AGCCGTTTCT TATGCTGACA ACGAGTTTAT GAACAATGCA
CTTGCTGAAA CATCGCAGAC AAGCGCGATT GCAGCTTACG CATTACCAAG CAGCGTAAAC
CTCAGTGTTA ACTATGAAAC TGTTGAAAAT GATCTAACTA ATAAGACATT AAATGAATCA
ACGGCATTCC AGGTAGAATA CAAGCCGTTT AACAATGTTC TGACTTATGT TGGTTACCAG
GTTGATCTTG GTGACGACGA TGCTACTACT GCAGATGATA ACAAGTGGGC ACTTGGTGCA
CGTTTATACC TATAA
|
|---|
| Protein sequence | MKKTLLAVAI PALLFANASS AVELYNDAAN TFSIGGHVAM GLAGSDEGET QVASVSPRIN
FEATRDLGEG YTMFLRTEWS VNTLDGGANS FSTRLGYLGL SHADNGTAII GTQWSPYYSV
GGVADLPVAF ANGSLYSDHY NLGTGRAERM VSYSNKLDLG TAGALKLGLG WQGKHAAYDT
RVQAALTYSV MDVTLGYAHN TGDVAADKAV SNIVSAKYGS YGNGLYAAVS YADNEFMNNA
LAETSQTSAI AAYALPSSVN LSVNYETVEN DLTNKTLNES TAFQVEYKPF NNVLTYVGYQ
VDLGDDDATT ADDNKWALGA RLYL
|
|---|
| |