| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0659 |
|---|
| Symbol | |
|---|
| ID | 4626896 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 844194 |
|---|
| End bp | 845399 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639795859 |
|---|
| Product | beta-ketoadipyl CoA thiolase |
|---|
| Protein accession | YP_942111 |
|---|
| Protein GI | 119944431 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02430] beta-ketoadipyl CoA thiolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.993676 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTAATG CATATATCTG CGATGCAATA AGAACACCAA TAGGTCGTTA CGGCGGCGGT
CTCTCACCAA TACGTCCGGA TGATCTGGGC GCTTTACCCA TTAAAGCCAT TATGGAACGT
AATCCGGATA TTGATTGGCG AGAAATTGAT GATGTTATTT ATGGGTGTGC AAACCAGGCT
GGAGAAGATA ATCGTAATGT TGCGCGCATG AGTCTGCTGC TTGCCGGATT GCCGGAAGAA
GTATCAGGTA CCACTATTAA TCGCTTATGT GGCTCTGGTA TGGATGCTAT TTCACTTGTT
GCAAGAAGTA TTAAGGCAGG TGATGCAGAG CTTATGATTG CTGGTGGTGT TGAATCAATG
TCACGCGCTC CTTTTGTGAT GGGTAAAGCG ACGTCAGCTT ACTCCCGCAA TGCAGAAATG
TACGATACAA CCATTGGATG GCGCTTTATA AATAAAGAGC TGCAAAAACA GTTTGGCACG
GACTCTATGC CTGAAACAGC AGAAAATGTC GCTGCCCGAT ACAATATCTC CCGCGAAGAT
CAGGATGCTT TTGCCCTAAG AAGTCAATAC CGCACTGAAC AAGCCCAGAA ATCGGGAAGA
CTGTCAGAAG AAATTGTGCC GGTGACCATT TTAAATCGCA AATCTGAACC AACCATTATT
GATAAAGATG AGCACCCGCG TCCAGAAACA ACGCTTTCTC AATTAGCTAA TTTACGTACT
CCTTTTGCTG AAAATGGCAG TGTGACTGCT GGCAATTCGT CTGGTGTTAA TGATGGTGCT
GCTGCAATGT TAATCGCAAG CGACAAAGCG GTTATTAAAT ACGGTTTATT ACCAAAAGCA
AAAGTGATTG CCTGTGCAAC TGCCGGGGTT GAGCCATCCA TAATGGGAAT GGGTCCAGCA
CCTGCGGTTA AAAAAGTGCT TAAAAAAGCG GGTTTATCAA TTGATGATAT GGATGTAATT
GAATTAAATG AAGCTTTTGC AGCACAATCA TTAGCCGTAT TACGTGAATT AGGGTTGCCT
GATGATGCTG ATCATGTCAA CCCAAATGGC GGTGCCATTG CATTAGGGCA TCCACTGGGA
ATGAGCGGTA CTCGACTTGT TATGGCTGCC ACTAATGAGT TAACACGACG TAAAGGAAAA
TATGCGCTTT GTTGCATGTG TATCGGTGTT GGTCAAGGCA TTGCCATGAT CATTGAACGC
GTTTAA
|
|---|
| Protein sequence | MINAYICDAI RTPIGRYGGG LSPIRPDDLG ALPIKAIMER NPDIDWREID DVIYGCANQA
GEDNRNVARM SLLLAGLPEE VSGTTINRLC GSGMDAISLV ARSIKAGDAE LMIAGGVESM
SRAPFVMGKA TSAYSRNAEM YDTTIGWRFI NKELQKQFGT DSMPETAENV AARYNISRED
QDAFALRSQY RTEQAQKSGR LSEEIVPVTI LNRKSEPTII DKDEHPRPET TLSQLANLRT
PFAENGSVTA GNSSGVNDGA AAMLIASDKA VIKYGLLPKA KVIACATAGV EPSIMGMGPA
PAVKKVLKKA GLSIDDMDVI ELNEAFAAQS LAVLRELGLP DDADHVNPNG GAIALGHPLG
MSGTRLVMAA TNELTRRKGK YALCCMCIGV GQGIAMIIER V
|
|---|
| |