Gene Ping_0657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0657 
Symbol 
ID4626855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp842236 
End bp843771 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content42% 
IMG OID639795857 
Product3-hydroxybutyryl-CoA dehydrogenase 
Protein accessionYP_942109 
Protein GI119944429 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAAAAT TACTATTTAA AACCGTCGCC GTGATAGGCG CGGGTGCAAT GGGAGCGGGT 
ATTGCTCAAG TTGCAGCGCA ATCTGGCTAT CAAGTTTATT TATTTGATCT TGCAAAAGGC
AAGGCTGAAG AAGCAAAAGA GAATATCGAA AAACAACTTG AGCGTCGCGT TAAAAAAGGA
CGGATGGAAC AACAGACACT GGAAAGCACT CTTCTGCGAA TTCACTGTTC ATCGGAATTA
TCTGAAATAG CGTCAGCAAA TCTGGTGATT GAAGCTATTG TTGAAAATCT TGAAATAAAG
CAGGGCTTAT TTAAAGAATT AGAAACAATC TGTTCAGCGG ATTGTATTTT AGCGTCGAAT
ACATCATCAA TATCGATTAC CGCGATTGCC AGTGCATTAA AATCGCCTGA ACGCTTTATT
GGCCTGCATT TTTTCAATCC TGCACCAGTG ATGAAATTAG TCGAAGTGAT TCAAGGTGTC
GCAACGGCTG ATAATATCGC AGAAACAGCG CAACAATGGG CACGCTCCTG CGGGAAAAAA
TCTGTTCTTG CCTGCTCTAT TCCCGGTTTT ATTGTCAATC GCGTCGCTCG GCCATTTTAT
GCTGAAGGGT TAAGAGCACT TGAAGAGAGC GTTGCAACTA TTGATGATAT TGATCACCTG
ATGCGTGCGT CGGCCGGGTT TAATATGGGG CCCTTTGAGC TGATGGATTT GATTGGTCAT
GATGTTAATT ATGCGGTCAC CAAAAGCGTA TTTGATGCCT GTTATCAAGA TCGCAGATAT
CAACCCTCAT TGGCTCAAAA AGAATTAGTC GATGCCGGAT TTTTTGGCCG TAAGAGTGGG
CGGGGTTTTT ATGATTACAG CGAAAAGGCA TATCAAAATA ATTATAATAC TTGCCGCCCG
GTGACCATGG ATATTAATGC TGTCACCCTG GCGACCCATT GGGATGACTC AGAATTAACA
CTTAAAGAGC TTGTTAACCA ATCCTTTGGT GATAACAAAA ATACAACATT GAATAATGCT
CTGTTAGCGA AAGGCGCCAT TCTAAAAGTT GATGACGTTC TTATTATTCC AACAAGAGGG
AAGACAGCAA CAGAACTTTC CCATAAATTA GGCTCCGCGG TGGTCACTAT TGATTACTGC
CGTGATTATT TGTCTACCTC GGTTGTTGCT GTCTCAGGTG CACTGCAAAA CAGCGATGCC
CAGACGGATA AAGTCATTGC CTTTCTACAG TTATTGGATA AACAAGTCAT TCTAATAAAA
GATTATCCCG GCATGATTGT TTGGCGCACA TTAAGTATGT TGAGTAACGA AGCATTAGAT
TTAGCTAATA AAAAGGGTGC CTCCGAAGCT GATATTGATA TCGCAATGAA AAGCGGCGTC
AATTATCCCT TAGGGCCCGT TGAGTGGGGT GAGAAATTAG GCTGGAAAAA CGTCAAAGAA
ACATTGGAGT CTTTAACGGC TTTTTATGGT GAAGAGCGCT ACCGGCCATC CCCCTTATTA
AGACAATTAT CTTACGGAGT CATTAATGGA GAATAG
 
Protein sequence
MEKLLFKTVA VIGAGAMGAG IAQVAAQSGY QVYLFDLAKG KAEEAKENIE KQLERRVKKG 
RMEQQTLEST LLRIHCSSEL SEIASANLVI EAIVENLEIK QGLFKELETI CSADCILASN
TSSISITAIA SALKSPERFI GLHFFNPAPV MKLVEVIQGV ATADNIAETA QQWARSCGKK
SVLACSIPGF IVNRVARPFY AEGLRALEES VATIDDIDHL MRASAGFNMG PFELMDLIGH
DVNYAVTKSV FDACYQDRRY QPSLAQKELV DAGFFGRKSG RGFYDYSEKA YQNNYNTCRP
VTMDINAVTL ATHWDDSELT LKELVNQSFG DNKNTTLNNA LLAKGAILKV DDVLIIPTRG
KTATELSHKL GSAVVTIDYC RDYLSTSVVA VSGALQNSDA QTDKVIAFLQ LLDKQVILIK
DYPGMIVWRT LSMLSNEALD LANKKGASEA DIDIAMKSGV NYPLGPVEWG EKLGWKNVKE
TLESLTAFYG EERYRPSPLL RQLSYGVING E