Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0657 |
Symbol | |
ID | 4626855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 842236 |
End bp | 843771 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639795857 |
Product | 3-hydroxybutyryl-CoA dehydrogenase |
Protein accession | YP_942109 |
Protein GI | 119944429 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAAAAAT TACTATTTAA AACCGTCGCC GTGATAGGCG CGGGTGCAAT GGGAGCGGGT ATTGCTCAAG TTGCAGCGCA ATCTGGCTAT CAAGTTTATT TATTTGATCT TGCAAAAGGC AAGGCTGAAG AAGCAAAAGA GAATATCGAA AAACAACTTG AGCGTCGCGT TAAAAAAGGA CGGATGGAAC AACAGACACT GGAAAGCACT CTTCTGCGAA TTCACTGTTC ATCGGAATTA TCTGAAATAG CGTCAGCAAA TCTGGTGATT GAAGCTATTG TTGAAAATCT TGAAATAAAG CAGGGCTTAT TTAAAGAATT AGAAACAATC TGTTCAGCGG ATTGTATTTT AGCGTCGAAT ACATCATCAA TATCGATTAC CGCGATTGCC AGTGCATTAA AATCGCCTGA ACGCTTTATT GGCCTGCATT TTTTCAATCC TGCACCAGTG ATGAAATTAG TCGAAGTGAT TCAAGGTGTC GCAACGGCTG ATAATATCGC AGAAACAGCG CAACAATGGG CACGCTCCTG CGGGAAAAAA TCTGTTCTTG CCTGCTCTAT TCCCGGTTTT ATTGTCAATC GCGTCGCTCG GCCATTTTAT GCTGAAGGGT TAAGAGCACT TGAAGAGAGC GTTGCAACTA TTGATGATAT TGATCACCTG ATGCGTGCGT CGGCCGGGTT TAATATGGGG CCCTTTGAGC TGATGGATTT GATTGGTCAT GATGTTAATT ATGCGGTCAC CAAAAGCGTA TTTGATGCCT GTTATCAAGA TCGCAGATAT CAACCCTCAT TGGCTCAAAA AGAATTAGTC GATGCCGGAT TTTTTGGCCG TAAGAGTGGG CGGGGTTTTT ATGATTACAG CGAAAAGGCA TATCAAAATA ATTATAATAC TTGCCGCCCG GTGACCATGG ATATTAATGC TGTCACCCTG GCGACCCATT GGGATGACTC AGAATTAACA CTTAAAGAGC TTGTTAACCA ATCCTTTGGT GATAACAAAA ATACAACATT GAATAATGCT CTGTTAGCGA AAGGCGCCAT TCTAAAAGTT GATGACGTTC TTATTATTCC AACAAGAGGG AAGACAGCAA CAGAACTTTC CCATAAATTA GGCTCCGCGG TGGTCACTAT TGATTACTGC CGTGATTATT TGTCTACCTC GGTTGTTGCT GTCTCAGGTG CACTGCAAAA CAGCGATGCC CAGACGGATA AAGTCATTGC CTTTCTACAG TTATTGGATA AACAAGTCAT TCTAATAAAA GATTATCCCG GCATGATTGT TTGGCGCACA TTAAGTATGT TGAGTAACGA AGCATTAGAT TTAGCTAATA AAAAGGGTGC CTCCGAAGCT GATATTGATA TCGCAATGAA AAGCGGCGTC AATTATCCCT TAGGGCCCGT TGAGTGGGGT GAGAAATTAG GCTGGAAAAA CGTCAAAGAA ACATTGGAGT CTTTAACGGC TTTTTATGGT GAAGAGCGCT ACCGGCCATC CCCCTTATTA AGACAATTAT CTTACGGAGT CATTAATGGA GAATAG
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Protein sequence | MEKLLFKTVA VIGAGAMGAG IAQVAAQSGY QVYLFDLAKG KAEEAKENIE KQLERRVKKG RMEQQTLEST LLRIHCSSEL SEIASANLVI EAIVENLEIK QGLFKELETI CSADCILASN TSSISITAIA SALKSPERFI GLHFFNPAPV MKLVEVIQGV ATADNIAETA QQWARSCGKK SVLACSIPGF IVNRVARPFY AEGLRALEES VATIDDIDHL MRASAGFNMG PFELMDLIGH DVNYAVTKSV FDACYQDRRY QPSLAQKELV DAGFFGRKSG RGFYDYSEKA YQNNYNTCRP VTMDINAVTL ATHWDDSELT LKELVNQSFG DNKNTTLNNA LLAKGAILKV DDVLIIPTRG KTATELSHKL GSAVVTIDYC RDYLSTSVVA VSGALQNSDA QTDKVIAFLQ LLDKQVILIK DYPGMIVWRT LSMLSNEALD LANKKGASEA DIDIAMKSGV NYPLGPVEWG EKLGWKNVKE TLESLTAFYG EERYRPSPLL RQLSYGVING E
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