| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0646 |
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| Symbol | |
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| ID | 4626844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 831631 |
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| End bp | 832935 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639795846 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_942098 |
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| Protein GI | 119944418 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.492149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAATTA CATTAATTGG ATTCACAGCG TTAATGGTAT TGATTTTACT GAGAATGCCC
GTTGCTTTTG CAATGGGGAT TGTTGGTTTC ATTGGTTATT CAGCGTTAGG CGATTGGAAT
TTTGGCGGGG CACTGTCAAT CAGTGCTAAC CGTTTAATAG ATACCTCTCA ATCTTATGGT
CTTTCTGTTA TCCCCCTGTT TATTTTAATG GGGAATTTTA TTACCAAAGC CGGATTATCC
CAGGAACTGT ATCGTGCTTG TTATGCCTTT TTAGGACACA AGAGAGGCGG TCTTGCAATG
GCGACTATTG CCGCGTGTGG GGGGTTTTCT GCAATATCAG GATCAAGCCT TGCGACAGCT
GCGACAATGG CAAAAGTTGC TATGCCACCG ATGCGTAAAT ACGGTTATTC CGATGGTTTG
GCTTCCGCAT CAATTGCCGC TGGCGGTACG TTAGGAATAT TAATTCCACC CAGCGTCATT
TTAATTATTT ACGGTGTGAT GACCGAACAA AGCATAAGAG ATTTATTTGC AGCAGGCTTT
ATTCCCGGTC TATTAGGTAT ACTTTTTTAT ATGCTGGCAA TACGTTTTGT TGTTTGGCGT
AATCCCAAGG CTGGGCCTTG TGGAGATAAG ATGGGTAAAA GTGAAAGATG GAATGCGGTT
CGCTCCGTGG CGTCTATTTT AGGTTTGTTT ATTGTTGTTA TGGGCGGAAT TTATGGCGGT
ATATTTACAC CGACGGAAGC CGCGGGAATT GGTGCCGGGG GCGCGTTCGT TATTGCGCTT
TATCGCCGGT CATTAACCTT TGTGATTCTG CGCGATATCC TTATTGAAAC TGCCCGTACA
ACTACCATGC TGTTTGGTGT CATTATTGGG GCATTAATAT ATTCAAATTT TGTTAATCGC
GCCGGCTTGC CCGCTGAACT TGTTAATCTA ATTACCTCTA TTGGTGCAGA GCCGATTATG
GTTATGCTGG CAATACTGGG TATTTATATT TTGTTAGGGA CAGTATTTGA AAGTTTATCG
ATGCTGTTAT TAACCATCCC GGTGTTTTAT CCACTGGTGC AAGCAATGGG ATTTGACCTT
GTTTGGTTTG GTATTGTGGT GGTGGTTGTG ACTGAAATCA GTTTGATTAC TCCACCCGTA
GGATTAAATA TATTTGTGTT AAGCAGTGTG ATTAAAGACA TTAAAACCAG TACCATTTTT
AAAGGCGTAA CCCCCTTTTG GTGTGCTGAT ATTATTCGTC TTTTATTATT ACTTTTTATT
CCTGCTTTAT CACTTTGGTT ACCACAGATG CTGTATAGCG CTTAG
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| Protein sequence | MLITLIGFTA LMVLILLRMP VAFAMGIVGF IGYSALGDWN FGGALSISAN RLIDTSQSYG
LSVIPLFILM GNFITKAGLS QELYRACYAF LGHKRGGLAM ATIAACGGFS AISGSSLATA
ATMAKVAMPP MRKYGYSDGL ASASIAAGGT LGILIPPSVI LIIYGVMTEQ SIRDLFAAGF
IPGLLGILFY MLAIRFVVWR NPKAGPCGDK MGKSERWNAV RSVASILGLF IVVMGGIYGG
IFTPTEAAGI GAGGAFVIAL YRRSLTFVIL RDILIETART TTMLFGVIIG ALIYSNFVNR
AGLPAELVNL ITSIGAEPIM VMLAILGIYI LLGTVFESLS MLLLTIPVFY PLVQAMGFDL
VWFGIVVVVV TEISLITPPV GLNIFVLSSV IKDIKTSTIF KGVTPFWCAD IIRLLLLLFI
PALSLWLPQM LYSA
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