Gene Ping_0638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0638 
Symbol 
ID4626836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp822417 
End bp824213 
Gene Length1797 bp 
Protein Length598 aa 
Translation table11 
GC content43% 
IMG OID639795838 
ProductGTP-binding protein LepA 
Protein accessionYP_942090 
Protein GI119944410 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0481] Membrane GTPase LepA 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA TTCGTAACTT TTCGATTATC GCCCATATCG ACCACGGTAA GTCGACTCTT 
TCAGATCGTT TAATCAATAC TTGTGGCGGC TTAAGTGACC GGGAAATGGA ATCTCAAGTA
TTAGATTCAA TGGATATTGA GCGCGAGCGT GGCATTACCA TCAAAGCGCA AAGTGTCACC
TTAGATTACC ACGCAAAAGA CGGTGAAACA TATCAGCTTA ACTTTATCGA CACTCCCGGA
CACGTTGATT TCGCTTATGA AGTATCGCGC TCATTAGCCG CCTGTGAGGG TGCCTTATTA
GTGGTGGATG CAGGTCAAGG TGTTGAAGCG CAAACATTGG CTAACTGTTA CACCGCGATG
GAAATGAACT TAGAAGTGGT GCCGATTTTA AATAAAATTG ATCTACCCGC CGCAGATCCT
GATCGTGTGG CCAAAGAGAT TGAAGATATT ATCGGTATTG ATGCGGCTGA TGCGGTGCGT
TGTTCTGCAA AAACGGGCGT TGGTATTGAT TTGGTATTGG AAGAGATTGT TCGTTGTATT
CCACCTCCTG TGGGCGATTT AACCGGACCG CTGCAGGCAT TAATTATCGA CTCATGGTTT
GATAACTATC AGGGTGTTGT CTCATTAGTA CGTGTTATGC ACGGCCAAAT TAAAGTGGGC
GATCGCATGA AAGTGATGTC TACTGGGCAG GTTAATCCGG TTGCTAAAGT GGGTTACTTT
ACACCCAAAC AAAAAGAAAC CGGCATTCTA AAAGCGGGTG AAGTGGGTTA TGTTATTGCG
GGTATCAAAG ATATTTTAGG TGCTCCCGTC GGTGATACTT TAACCATTTC AGGTCATGAG
GCTGCGAAAG CATTACCCGG TTTTAAACGT GCTAAACCTC AGGTTTATGC GGGACTATTT
CCGGTCAGTT CCGATGATTA CGAAAACTTT CGTGATGCAT TAGCGAAGTT AAGTATTAAT
GATGCTTCAC TCTTTTATGA ACCAGAAAAC TCCTCTGCAT TAGGATTTGG TTTCCGTTGT
GGCTTCCTCG GTTTATTGCA CATGGAAATC GTGCAAGAAC GTTTGGAGCG AGAATACGAC
CTGAATCTTA TTACCACTGC GCCAACGGTT GTTTATGAAG TCGAAACAAC TAGGGGTGAA
GTGCTCCACA TTGATAGCCC CGCTAAGTTC CCGGCGATGA ATGATATTGA GGAAATCCGC
GAGCCCATTG CGGAATGTAA TATTTTAGTG CCGCAGGAGT ACTTGGGTAA TGTCATCACA
CTTTGTGTTC AGAAACGCGG TATGCAAACC AAAATGGTCT ATCACGGTAA GCAAGTGGCG
TTAACTTACC ATATTCCGAT GGGCGAGGTT GTAATGGACT TTTTTGACCG TTTGAAATCA
ACCAGTCGCG GTTATGCCTC GCTTGAGTAT AATTTTGTTA AGTTTGAAGC GGCCGATATG
GTCCGCGTTG ATGTCTTAAT CAATAGTGAA CGTGTGGATG CCTTAGCGTT AATTACGCAT
CGTGCAAACT CTGAAAGCTA TGGGCGTGAT CTGGTGGATA AAATGAAAGA TCTCATTCCT
CGCCAAATGT TCAATATTGC ATTACAAGCT GCTATTGGAA GTAAGATTAT TGCCCGTTCT
ACGGTTAAAC AGTTGACTAA AAATGTATTG GCAAAATGTT ACGGTGGTGA TATCAGCCGT
AAGAAAAAAT TGTTGAAAAA GCAAAAAGAA GGTAAAAAAC GCATGAAATC TGTGGGTAAC
GTAGATATAC CGCAGGAAGC GTTTTTGGCT GTATTGCACA TAGGTAAAGA CAAATAA
 
Protein sequence
MKNIRNFSII AHIDHGKSTL SDRLINTCGG LSDREMESQV LDSMDIERER GITIKAQSVT 
LDYHAKDGET YQLNFIDTPG HVDFAYEVSR SLAACEGALL VVDAGQGVEA QTLANCYTAM
EMNLEVVPIL NKIDLPAADP DRVAKEIEDI IGIDAADAVR CSAKTGVGID LVLEEIVRCI
PPPVGDLTGP LQALIIDSWF DNYQGVVSLV RVMHGQIKVG DRMKVMSTGQ VNPVAKVGYF
TPKQKETGIL KAGEVGYVIA GIKDILGAPV GDTLTISGHE AAKALPGFKR AKPQVYAGLF
PVSSDDYENF RDALAKLSIN DASLFYEPEN SSALGFGFRC GFLGLLHMEI VQERLEREYD
LNLITTAPTV VYEVETTRGE VLHIDSPAKF PAMNDIEEIR EPIAECNILV PQEYLGNVIT
LCVQKRGMQT KMVYHGKQVA LTYHIPMGEV VMDFFDRLKS TSRGYASLEY NFVKFEAADM
VRVDVLINSE RVDALALITH RANSESYGRD LVDKMKDLIP RQMFNIALQA AIGSKIIARS
TVKQLTKNVL AKCYGGDISR KKKLLKKQKE GKKRMKSVGN VDIPQEAFLA VLHIGKDK