Gene Ping_0633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0633 
Symbol 
ID4624739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp813765 
End bp815858 
Gene Length2094 bp 
Protein Length697 aa 
Translation table11 
GC content41% 
IMG OID639795833 
Productoligopeptidase B 
Protein accessionYP_942085 
Protein GI119944405 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1770] Protease II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAATAT TGTCACACTT ACAACAAGCA GAGAAAATCA TGAATTTAAA ACTTAAACTG 
TCAGCCCCCC AAGCGCTAAA AAAAAACCAC ATTCATGAAA TTCATGGTGA TTTACGTCAA
GATGATTATT TTTGGTTGCG TGATGATCAT CGTCAGAATC AGCAGGTGAT CGATTATTTA
GAGCAAGAAA ATGCCTTTAC CGAGCAGGAG ATGAGCCCCT TAGCTCCCCT GCAGACTGAG
TTGTATGACG AGATGGTGGC ACGGCAGGAG CCTGAGCTTG AATCTGTTCC TTATTTTAAA
CAAGGGTTTT GGTATACCGT CCGCTTTGCA GAAGGCAAAG ATTATATGGT TTATAGCCGT
AGAAAAGAAT CGATGGCGGC CTCAGAGCAG ATACTTGTCG ATTGCAATGA ACGTGCACAG
GGGCTTTCGT ATTATCAATT GGGTGATGTG ACCCTATCAA GTAATTCAAT GTTGATGGCA
TTCTCCGAAG ATGTGGTTGG TCGCCGTCAA TATACCTTAG GTTTTAAAAA TCTTGAGACA
GGTGAGATTC TAAATGATCT TATTGAAGAT GTTTCTGACG TGGTCTGGGC AAATGATAAT
CAAACCGTTT TTTATGTTAA ACAACACCCG GAAACCTTAT TACCCTACCA GGTATACCGC
CACAGATTAG GTGACAGAAT AAAGGATGAC GTATTAGTTT ATGAAGAGCT GGATGATACC
TTCTACGTGA GTCTTGACAA AACACGTTCC GAGCAGTATC TGGTTATTGC CATTGACAGT
ACCACCACCT CTGAATGTTT AGTGTTAGAT GCTGATCAGC CGATGGGAGA GTTTGTCTCA
TTTTTACCCC GGTTACGCGG GCATGAATAC AGTATTGATC ATTTCCAGGA ACAGTTTTAT
ATTCGCACCA ATAACAGTGG TAAAAACTTT GCTTTAAAAA CATCGACTTT ACTGATCAAT
CACAATGCAG ATGCTTGGGT TACTATTATT GAAGCGCGTA ACGATGTGCT GTTGGAAGGT
TATGAATTGA TGAAGGAGTG GTTAATTGTT GAAGAGCGTC AAGATGGTTT ACCCCTGTTA
CGGCAGATTA ATCATCAAAC CGGTGAGTCA AAAACCTTAA CGTTTAGTGA TCCTGTCTAT
ACCGTTTTTA GTCATTTTAA TCCTGAAGCT AATACAGCTA AATTTCGCTA TCAATATACC
TCATTTACCA CTCCCTCATC GGTCTATGAA TTGGATTTAA ACAGCGGTGA AACCATTCTA
TTAAAACAAA GCCAAGTAAT GGGCGAGTTT GACAGTCATG ACTATAAAAG CGAACGTGTT
TGGGTCACCG CGCGTGATGG TGTACAGGTT CCTGTTTCTC TGGTTTATAG TAAAAAATTG
TTTAATCACG AAAATCCAAT ACTTATTTAT GCCTATGGCT CTTATGGCCA TAGTTTAGAT
ATTGGTTTTG ATTCTTCAAA CTTAAGTCTT CTGGATCGCG GTTTTGTGTA TGCCATTGCA
CATATTCGAG GTGGAGAAGA GTTAGGACGG TCTTGGTATG AAGAGGGGAA GTTGCTTAAG
AAACAAAATA CCTTTAATGA TTTTATTGAT GTAACGAAAA GCCTAATCAG CACTGGTTAC
GGGTCAGAGG AGAAGGTCTT TGCGATGGGC GGAAGCGCGG GGGGATTATT GATGGGGGCA
ATAATTAACC AGGCACCGGA ATTATATAAA GGGGTGGTGG CAGTGGTGCC CTTTGTTGAC
ATAGTATCAA CGATGTTAGA CGAATCCATT CCGCTGACCA CGGGGGAATA TGATGAGTGG
GGTAATCCAA ATGAAAAAAA TTATTATCAC TATATGCTTT CCTATAGCCC CTACGATCAA
GTGAAAGCCG TGGACTATCC TAATATGTTG GTGACCACCG GCTTACATGA TTCACAGGTG
CAATATTGGG AACCTGCCAA GTGGGTGGCT AAATTGCGCG CCTTAAAGAC GGATCACAAC
CAATTACTTT TATATACGGA TATGGAAGCC GGACACGGTG GTAAATCGGG TCGCTTTAAA
CACTTTGAGG ATACCGCCAG AGAATTTGCC TTTATTCTTT CTTTAGTGAA ATAA
 
Protein sequence
MLILSHLQQA EKIMNLKLKL SAPQALKKNH IHEIHGDLRQ DDYFWLRDDH RQNQQVIDYL 
EQENAFTEQE MSPLAPLQTE LYDEMVARQE PELESVPYFK QGFWYTVRFA EGKDYMVYSR
RKESMAASEQ ILVDCNERAQ GLSYYQLGDV TLSSNSMLMA FSEDVVGRRQ YTLGFKNLET
GEILNDLIED VSDVVWANDN QTVFYVKQHP ETLLPYQVYR HRLGDRIKDD VLVYEELDDT
FYVSLDKTRS EQYLVIAIDS TTTSECLVLD ADQPMGEFVS FLPRLRGHEY SIDHFQEQFY
IRTNNSGKNF ALKTSTLLIN HNADAWVTII EARNDVLLEG YELMKEWLIV EERQDGLPLL
RQINHQTGES KTLTFSDPVY TVFSHFNPEA NTAKFRYQYT SFTTPSSVYE LDLNSGETIL
LKQSQVMGEF DSHDYKSERV WVTARDGVQV PVSLVYSKKL FNHENPILIY AYGSYGHSLD
IGFDSSNLSL LDRGFVYAIA HIRGGEELGR SWYEEGKLLK KQNTFNDFID VTKSLISTGY
GSEEKVFAMG GSAGGLLMGA IINQAPELYK GVVAVVPFVD IVSTMLDESI PLTTGEYDEW
GNPNEKNYYH YMLSYSPYDQ VKAVDYPNML VTTGLHDSQV QYWEPAKWVA KLRALKTDHN
QLLLYTDMEA GHGGKSGRFK HFEDTAREFA FILSLVK