Gene Ping_0617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0617 
Symbol 
ID4624354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp799429 
End bp800388 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content43% 
IMG OID639795817 
ProductKpsF/GutQ family protein 
Protein accessionYP_942069 
Protein GI119944389 
COG category[M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms 
COG ID[COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID[TIGR00393] KpsF/GutQ family protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.851934 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAAT TTACTTTATC AACGTCCCAA TTAATTAAAG AAGTTCGCAC TGTATTTGAT 
GTGCAAAGCC AAGCACTAAC CTCCCACAGT CAGCGTCTTG GTGATGAATA TCTGCAAGCG
TTAGCATTAA TGAAAAACTG TACAGGTCGG ATCATTGTTT GTGGTATGGG GAAATCAGGG
CATATTGGTA AAAAAATATC AGCCACCTTG GCGTCGTTAG GTACGCCTTC TTTTTACATG
CATCCCGGCG AAGCATTTCA TGGTGATTTA GGCATGGTGA CGCAAAATGA TCTCCTTTTG
CTTATCTCAT ACAGCGGTGA AACAGATGAA TTGCTTAAAA TCATTCCATC CATTCAGCAC
TCCGGTAATA AGATAATCTC CATTACTGGC GGTTTAAATT CTACTTTAGC TAAAAACTCC
GATGTTGTTT TAGATGCAAG TGTTGAAAAA GAGACTTGTC CGAATAATTT AGCCCCGACA
ACATCCACTA CTTTAAGTTT GGTGATTGGC GACGCGTTAG CCTCGACCTT AACCTTAGAG
AAAAACTTTA GTCCAATGGA TTTTGCACGT TTCCATCCGG GGGGCAGTCT GGGTAAGCGA
TTGCTCACTT TTGTTAAAAA TGAAATGCGC ACTGAAAAAT TACCCTTAGT GCAAGCGCAA
ACCTCTTTGA CGGATGCCTT GATGGTAATG ACAGAAACCC GCACCGGTCT TGCGCTAGTC
ATGGAAGAGG GCAACCTGCA GGGGGTTATC ACCGATGGTG ATGTACGTCG ATTCTTGATT
TCAGGCCAAA GCATTGCAGA CTGTACTGCG CAACAATTAA TGAACAGCTC GCCTTGTTTT
ATCTCTCCGA ATGCGCGTTT AACCGAGGCT GAAGAATTGA TGCGTGAAAA ACATATTAAG
TGGCTGGTGG TGAGTGAAGA TGGTAAAAAA CTTGATGGTA TTATTGAGTG GGTGCAATAA
 
Protein sequence
MTQFTLSTSQ LIKEVRTVFD VQSQALTSHS QRLGDEYLQA LALMKNCTGR IIVCGMGKSG 
HIGKKISATL ASLGTPSFYM HPGEAFHGDL GMVTQNDLLL LISYSGETDE LLKIIPSIQH
SGNKIISITG GLNSTLAKNS DVVLDASVEK ETCPNNLAPT TSTTLSLVIG DALASTLTLE
KNFSPMDFAR FHPGGSLGKR LLTFVKNEMR TEKLPLVQAQ TSLTDALMVM TETRTGLALV
MEEGNLQGVI TDGDVRRFLI SGQSIADCTA QQLMNSSPCF ISPNARLTEA EELMREKHIK
WLVVSEDGKK LDGIIEWVQ