| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0616 |
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| Symbol | |
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| ID | 4624353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 797699 |
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| End bp | 798886 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639795816 |
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| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
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| Protein accession | YP_942068 |
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| Protein GI | 119944388 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0538253 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAACTC TGTTAGAAGT TCAAAACCTC TACAAGGTAT TTGGACCGTC TCCAGAAGAA
GCTTTCCCTT TGATTGAGCA GGGGCTCGAT AAAGATGAAA TATTTGCAAA GACCGGGCTT
ACTGTCGGGG TCAACAATGT TTCTTTGACC ATTGAGAAAG GAGAAGTCTT CGTTATTATG
GGATTGTCTG GTTCCGGGAA ATCAACCCTG GTCCGCCTTC TAAACCGTTT AATCGAACCC
ACCAGTGGTA AAGTCTTATT TCAGGGTAAA GATATTGCTA GCATATCAAC AGAAGAGCTG
CGTCAAGTTC GTCGCAAGCA CATTTCTATG GTATTCCAAA ACTTCGCCTT AATGCCGCAT
ATGAATGTCA TTGATAATGC CGCATTTGGC TTGGAACTGA GCGGTATTGA CATTGATGAA
CGTCATAAAG CCGCACGTGA AGCGCTCACC CGCGTCGGTC TTGAAATGCA TTGTGAATCC
TATCCCGATG AACTTTCCGG CGGTATGAAA CAGCGGGTGG GATTGGCAAG AGCCTTAGCC
AATGACCCGG ATATTCTATT GATGGATGAA GCCTTCTCGG CCCTTGACCC CTTGATTCGA
TGCGAGATGC AGGATGAGCT GATCCGCCTG CAAAATGACG ATAAACGCAC CATTGTATTT
ATTTCACATG ATCTAGATGA AGCCATGCGC ATCGGCGATC GTATTGCTAT TATGCAGGGC
GGTATCGTCG TCCAAGTCGG TACACCCGAT GATATTCTGC AGAATCCGGC GAATGACTAT
GTCAGCTCCT TTTTCAGTGG TGTCAATGTG GCCACTGTCT TTTGTGCTAA GGATATCGCC
AAAAAAACAC CGGCTGCCGT CTTTAAGAAA CATGAAAATG ACAGCCCTGC CGTTGCGATG
CAGTTACTGC TCGATAGTGA GCGTGACTTC GGAATTGTTG TTGATCGTGC CAACCGTTTC
ACGGGTATTG TTTCAACGGA CTCTTTACGT ATCGCGAAAA AAAATCAGGA TACACTCAGC
AGCGCACTGC TCGAAAATAT CACCACCATC AAACCCGATG TCTCGGTCAG CGAATTAATT
GGCCAGGTAG CTGACGTGCG TTATGCCGTA CCCGTTGTTG CTGAAGATGG CACCTACCAC
GGGGTGATCA CTAAATCACG CTTATTAAAA ATTTTAGATA GGGAATAA
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| Protein sequence | MSTLLEVQNL YKVFGPSPEE AFPLIEQGLD KDEIFAKTGL TVGVNNVSLT IEKGEVFVIM
GLSGSGKSTL VRLLNRLIEP TSGKVLFQGK DIASISTEEL RQVRRKHISM VFQNFALMPH
MNVIDNAAFG LELSGIDIDE RHKAAREALT RVGLEMHCES YPDELSGGMK QRVGLARALA
NDPDILLMDE AFSALDPLIR CEMQDELIRL QNDDKRTIVF ISHDLDEAMR IGDRIAIMQG
GIVVQVGTPD DILQNPANDY VSSFFSGVNV ATVFCAKDIA KKTPAAVFKK HENDSPAVAM
QLLLDSERDF GIVVDRANRF TGIVSTDSLR IAKKNQDTLS SALLENITTI KPDVSVSELI
GQVADVRYAV PVVAEDGTYH GVITKSRLLK ILDRE
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