Gene Ping_0609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0609 
Symbol 
ID4624346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp791039 
End bp792241 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content43% 
IMG OID639795810 
Productubiquinone biosynthesis visC protein 
Protein accessionYP_942062 
Protein GI119944382 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID[TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCAAT CATACGACTT AACCATAGTG GGCGGCGGAA TTGTCGGGCT GACGTTGGCA 
GCCTCCCTAG CAGACAGTGC ATTATCGATT GCGCTGATTG AAACCAGCAA CAGGCCAATA
TTACCCGAAA AGCCAGTTAA TCGAGTCAGT GCTATTAGCT TCGCCAGTAA AAAGATTTTT
GAAAAATTAA GCGTCTGGCA GCAGCTTGAT AGTGGAAGAA TAACGGCATA CGACAGCATG
CTGGTCTGGG ACAAGGATAG TTTTGGAAAA ATTGAATTTT CTGCTCAGCA AGTCGGATAT
TCGGAGCTCG GTTACATTAT TGAGAATGAC AATCTTTGCC TTGCCTTACT CGATACAGTA
CAAAAACAAA AGAATGTCTC TTTTTACAGT CCAGATAGCT TAAATGATAT TGTTTTTGGT
GAAGGTGAAG CCTGGTTAAC CCTGCACAGT GGTAAAACTC TGACCTCGAA ATTGGTTGTA
GGGGCTGACG GTGCAAATTC ATGGTTACGG GAAAAATCCA CTATTCCTTT AACCTTTTGG
GATTACCAGC ATCATGCACT GGTCGCGACG ATTAAAACAG AACTGCCGCA TGAGCATTGT
GCCCGGCAAA TTTTCACGCC CGACGGGCCA CTCGCTTTTT TGCCTCTTTT TGAACAGAAT
TTATGCTCTA TTGTTTGGTC AGTATCACCG CAAAAAGCTG AGCAGTTAAA AAATTTAACG
GCTGTCGAGT TTAATAAACA ATTATCGCGC AATTTTGATA ACCGTTTAGG GCTGTGTGAA
TTGCAAAGTG AGCGCTTCAG CTTTCCTCTT CGCATGCGTT ATGCGCGAGA CTTTGCCAAA
CACCGAATCG CTTTAATTGG CGATGCTGCA CATACTATCC ATCCTCTAGC GGGGCAGGGG
GTTAACCTTG GTTTGTTAGA TGCGGTCAGT TTAGGACAAA CCATTGAACA AAATATTGCG
GCAGAAAAGG ATATTGGTTT ATATAAAAAC CTCCGTTATT TTGAGCGTTG GAGAAAAACT
GAAGCCGCAC AAATGATTGC GTCAATGGAA TTGTTAAAGC AATTATTTGA GGGAGACAAT
CCCCTCCAGA AAGCCCTTCG CGATGTTGCA CTGGTTTTTA CCGACCAAGT CAGTCCACTG
AAAAAATCAT TTATTAAACA GGCAATGGGC TTAAGTGGAG AATTACCCCT ATTGGCAAAA
TAA
 
Protein sequence
MMQSYDLTIV GGGIVGLTLA ASLADSALSI ALIETSNRPI LPEKPVNRVS AISFASKKIF 
EKLSVWQQLD SGRITAYDSM LVWDKDSFGK IEFSAQQVGY SELGYIIEND NLCLALLDTV
QKQKNVSFYS PDSLNDIVFG EGEAWLTLHS GKTLTSKLVV GADGANSWLR EKSTIPLTFW
DYQHHALVAT IKTELPHEHC ARQIFTPDGP LAFLPLFEQN LCSIVWSVSP QKAEQLKNLT
AVEFNKQLSR NFDNRLGLCE LQSERFSFPL RMRYARDFAK HRIALIGDAA HTIHPLAGQG
VNLGLLDAVS LGQTIEQNIA AEKDIGLYKN LRYFERWRKT EAAQMIASME LLKQLFEGDN
PLQKALRDVA LVFTDQVSPL KKSFIKQAMG LSGELPLLAK