| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0600 |
|---|
| Symbol | |
|---|
| ID | 4624246 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 782254 |
|---|
| End bp | 783483 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639795801 |
|---|
| Product | D-3-phosphoglycerate dehydrogenase |
|---|
| Protein accession | YP_942053 |
|---|
| Protein GI | 119944373 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAGC TTTCGCTTGA TAAAGATAAA ATAAAAATTC TGCTACTTGA AGGATTACAT
CAAAGTGCGG TTGATACTTT CACCCAGGCT GGTTACAACA ACATCCAAAA CATCAAAACA
GCGTTAAGCG AAGAAGAATT AATTGAAAAA ATTAAAGATG CACATTTTGT TGGTATCCGT
TCCCGTTCTA ACCTTAATGC AACCGTATTA GCTGCCGCAG ATAAACTGGT TGGCATCGGT
TGTTTTTGTA TCGGTACCAA TCAGGTTGAT TTGAATGCGG CTCAAGCAAA AGGAATCGCA
GTATTTAACG CGCCTTTTTC AAATACCCGC AGTGTTGCTG AATTAGTGTT AGGTCAGTCA
TTATTATTAT TGCGTGGTAT TCCAGAGCGT AACGCAAAAG CGCATCGCGG CGAGTGGGAT
AAATCAGCCA CTAAGTCCTA TGAAGCGCGT GGTAAAAATT TAGGTATTAT TGGCTATGGC
CATATTGGAA CTCAGTTTGG TATTCTTGCT GAAAACTTAG GTTTTAAGGT GTCATATTAC
GACGTCGAAA ATAAATTAAG CTTAGGTAAT GCGGTACAGA TAGCGACAAT GGAAGCCTTG
CTTGCTCAGT CTGATATTAT TAGTCTGCAT GTTCCTGAAC TTGACTCGAC TAAAAACATG
ATGGGTGCTA AAGAATTTGC ACAAATGAAA GATGGTGCGA TCTTTATGAA CGCAGCACGT
GGCACCGTTG TTGATATCCC GGCGTTATGC GCAGCACTTG AGAGTAAAAA ACTTTCTGGA
GCCGCTATTG ATGTGTTCCC AACTGAGCCC GGATCAAATA AAGAAGAGTT TATTTCTCCG
TTGCGTAAGT TTGATAACGT ACTCTTAACT CCCCACGTTG GTGGCAGCAC CCAGGAAGCA
CAAGAAAATA TTGGCTATGA AGTTGCGGGC AAGTTAGTTA AATACTCTGA TAATGGTTCA
ACATTGTCTT CTAATAACTT TCCTGAAGTA TCTCTACCGG TGCATGTTGA TGCCAGCCGT
TTACTGCATA TTCATAAAAA TATGCCGGGT ATTCTAACCA AAATCAACTT GACCTTTGAA
GAGTATGGCA TCAATATTGC GGCACAATAC CTGCAAACAA ATGCAAATAT TGGTTATGTG
GTCATTGATG TAAATAGTGA TGATGCGCAA CTTGCATTAG CTAAATTAAA TGAGATCGAA
GGGACAATTA AAGCGCGTTT ATTAAGATAA
|
|---|
| Protein sequence | MTKLSLDKDK IKILLLEGLH QSAVDTFTQA GYNNIQNIKT ALSEEELIEK IKDAHFVGIR
SRSNLNATVL AAADKLVGIG CFCIGTNQVD LNAAQAKGIA VFNAPFSNTR SVAELVLGQS
LLLLRGIPER NAKAHRGEWD KSATKSYEAR GKNLGIIGYG HIGTQFGILA ENLGFKVSYY
DVENKLSLGN AVQIATMEAL LAQSDIISLH VPELDSTKNM MGAKEFAQMK DGAIFMNAAR
GTVVDIPALC AALESKKLSG AAIDVFPTEP GSNKEEFISP LRKFDNVLLT PHVGGSTQEA
QENIGYEVAG KLVKYSDNGS TLSSNNFPEV SLPVHVDASR LLHIHKNMPG ILTKINLTFE
EYGINIAAQY LQTNANIGYV VIDVNSDDAQ LALAKLNEIE GTIKARLLR
|
|---|
| |