Gene Ping_0582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0582 
Symbol 
ID4624137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp760879 
End bp762258 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content42% 
IMG OID639795783 
Productpoly(A) polymerase 
Protein accessionYP_942035 
Protein GI119944355 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase 
TIGRFAM ID[TIGR01942] poly(A) polymerase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTACAA AAAAAAGTGA ACAAAAACAA ATCCCAGCAG CGGATCCCTT TAAAATCCCG 
CGAGAGTCAC ACAATCTCTC CCGTAAGGAC ATAGATGAAA ACGCCTTAAA GGTACTTTAT
CGCCTTCATA ACGCGGGATT CAGGGCACTA TTGGTGGGCG GTGGTGTGCG TGATTTATTA
CTTGGCCTAA AACCTAAAGA TTTTGACATT ACGACCAATG CAACACCCGA AGAGGTTAAA
GCTTTATTCC GTAACTGCCG TTTAATTGGC CGTCGCTTTC GTCTCGCGCA TATTTTATTT
GGCCGTGAAG TGATTGAAGT GGCTACTTTT CGTGGTCATC ACGATGATGA TAATGGTCAG
GATGCACAAA AAGTAAAACA ATCAAAAGCG GGCATGTTAC TGCGCGATAA TGTTTACGGC
TCGTTAGAAG AAGATGCTGA GCGTCGTGAT TTTACCGTTA ATGCCCTTTA TTACGATATT
GCTGATTTTG CCATTTATGA TTTTTGTAAT GGCATGAAGG ATTTACAAGA GCGCAGGCTA
ACCTTGATTG GTGATCCGGA GGTACGTTAC CGGGAAGATC CGGTGCGGAT GATAAGGGCT
ATTCGCTTTT CAGCAAAATT AGATCTTACC ATCAGTGAAG AGTGTGCAGA GCCTATTCGC
CGTTTAGCCC CCCTCTTACA AGATATACCG GCTGCGCGCC ATTTTGATGA GGTTATTAAA
TTACTGCTTT CAGGCCAGGG GTTAGTCACT TATCGTTTAT TAAAAGAATA CAAATTATTA
CAGGTATTAT TTCCCATTCT CTTTAAAGAT GGTGAAGATG ATAAAGCGAC CCAGCTAATT
GAACAGGCAC TGACCGATAC GGATCGAAGA ATTGCGCAAG GTAAGCACCT TACCCCGGCT
TATATTTACG CAATTATCCT CTGGTATCCG CTTGAGCAAC GTGCACAGGA GATGGCTTTT
GAAGGGGGGT TAGATTATTA TGATGCCTTC TTATTAGCAA TGAATGAAGT CCTTAGCATA
CAAGTCAAAA CAATTGCTAT TCCAAAACGT TTTACGGCAG CTGTTCGTGA TATTTGGGTG
TTGCAGTTAC GTTTACCTCG ATTTGGCGGA AAACGCGCAC AACGAGTTTA TCAGCACATT
AAATTCAGGG CTGCTTTTGA TTTTTTATCG CTGCGTGCAA AAGTAGAGCA AAGCTCAGAA
CTGGCTGAAT TAACTGCGTG GTGGCAGGAA TATCAAAATC ATAATAAATT ACCGGATCAC
AGTTACGCTG GTAATGCGAG CAAAGCCACT GAAGTTAAAC CTGCGGATAA AAAACCCTAT
AAAAAACGCA GATACCCCAA TAAAAAACAT AAAAAAACAG AGACTACTGG CGTTGATTAG
 
Protein sequence
MFTKKSEQKQ IPAADPFKIP RESHNLSRKD IDENALKVLY RLHNAGFRAL LVGGGVRDLL 
LGLKPKDFDI TTNATPEEVK ALFRNCRLIG RRFRLAHILF GREVIEVATF RGHHDDDNGQ
DAQKVKQSKA GMLLRDNVYG SLEEDAERRD FTVNALYYDI ADFAIYDFCN GMKDLQERRL
TLIGDPEVRY REDPVRMIRA IRFSAKLDLT ISEECAEPIR RLAPLLQDIP AARHFDEVIK
LLLSGQGLVT YRLLKEYKLL QVLFPILFKD GEDDKATQLI EQALTDTDRR IAQGKHLTPA
YIYAIILWYP LEQRAQEMAF EGGLDYYDAF LLAMNEVLSI QVKTIAIPKR FTAAVRDIWV
LQLRLPRFGG KRAQRVYQHI KFRAAFDFLS LRAKVEQSSE LAELTAWWQE YQNHNKLPDH
SYAGNASKAT EVKPADKKPY KKRRYPNKKH KKTETTGVD