Gene Ping_0574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0574 
Symbol 
ID4624129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp754459 
End bp755232 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content40% 
IMG OID639795775 
ProductABC-2 type transporter permease protein 
Protein accessionYP_942027 
Protein GI119944347 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAATA GTAATTACCT CACAGCGTTA AAAAGTCTGT GCATAAAAGA AGTTAACCGT 
TTTTTACGGA TTTGGGTACA AACACTTATC CCTCCCGCCA TCACGATGAC CCTTTATTTT
GTTATTTTTG GCAATTTAAT CGGCAAACGT ATTGGTGAAA TGAGTGGTTT CAGTTATATG
TCATTTATTG TCCCCGGTAT TATTATGATG GCGGTGATTA CCAACTCCTA CTCAAACGTG
GCATCTTCCT TTTTCAGTGC CAAGTTCCAG CGTAATGTTG AAGAGTTATT GGTCGCGCCT
GTTCCTAATT ATATTATTAT TTGGGGCTAC GTCGGGGGGG GAGTGATCCG CGGTTTACTG
GTCGGGTTTA TAGTGACTTG TGTTTCTCTG TTTTTTGTTG AGTTACAGAT TTTTAATATA
TTCGCCTTAT TATTAAGTGT TTTATGTACC TCAATCCTGT TTTCACTGGC GGGTTTGTTA
AATGCGATAT TTGCCCGTAC TTTTGATGAT ATTAGTATTA TTCCTACCTT TGTATTAACG
CCGTTAACCT ATCTGGGTGG GGTCTTTTAT TCAATTGATC TGCTCCCTGA TTTTTGGCAA
ACCGTGTCGC ACTTTAACCC CGTATTTTAT ATGATCAATG CCTTCCGTTA TGGTTTTCTG
GGTATTGCAG ATGTGTCATT GCTTTGGTCC TTTTCAATGA TAGGCAGCTT TATTGTTCTG
CTTTATGGGT TGATCACTCT GCTACTCCGA AAAGGTGTGG GTATCCGCTC ATGA
 
Protein sequence
MMNSNYLTAL KSLCIKEVNR FLRIWVQTLI PPAITMTLYF VIFGNLIGKR IGEMSGFSYM 
SFIVPGIIMM AVITNSYSNV ASSFFSAKFQ RNVEELLVAP VPNYIIIWGY VGGGVIRGLL
VGFIVTCVSL FFVELQIFNI FALLLSVLCT SILFSLAGLL NAIFARTFDD ISIIPTFVLT
PLTYLGGVFY SIDLLPDFWQ TVSHFNPVFY MINAFRYGFL GIADVSLLWS FSMIGSFIVL
LYGLITLLLR KGVGIRS