| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0566 |
|---|
| Symbol | pntA |
|---|
| ID | 4623943 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 734448 |
|---|
| End bp | 735992 |
|---|
| Gene Length | 1545 bp |
|---|
| Protein Length | 514 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 639795762 |
|---|
| Product | NAD(P) transhydrogenase subunit alpha |
|---|
| Protein accession | YP_942019 |
|---|
| Protein GI | 119944339 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3288] NAD/NADP transhydrogenase alpha subunit |
|---|
| TIGRFAM ID | [TIGR00561] NAD(P) transhydrogenase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATAG GTATACCTAG AGAGATCCAA GAGAATGAAA ACCGCGTGGC AGCAACACCA
AATACTGTTG AGCTGCTCAT TAAACAGGGT TTTACTTTTC TTGTGGAAAA AAACGCCGGA
ATAGCTGCCA GCTTTTCTGA TCAAGCCTAC CAGAATTCTG GTGCCGAAAT TGGCACTGAT
AAAAATCTGG TATGGCAATC AGATATTATT TTCAAAGTGA ATGCGCCTAC CGATACTGAG
ATTACCTTAA TGAAGGAAGG GGCGACCCTA GTCAGTTTCA TCTGGCCAGC ACAAAACCCT
GAATTACTTG AAAAATTAAC CAGTAAAAAA ATCAGTGTTA TTGCAATGGA TTCAGTACCA
CGTACTTCCC GGGCACAAGC ACTTGATGCA CTGAGCTCAA TGGCCAATAT CGCAGGTTAC
CGTGCCGTTA TTGAAGCCGC TAATCAGTTT GGCCGTTTCT TCACCGGACA GATCACGGCA
GCAGGTAAAG TACCACCCGC CAAGGTACTG ATTATAGGCG CGGGTGTTGC AGGTCTTTCT
GCATTAGGCA CCGCCGGCAG TTTAGGCGCA ATTGTACGCG CATTTGATAC TCGCCCTGAA
GTAAAAGAGC AAGTTGAGAG TATGGGTGCT GAATTCTTAG TCGTTGAATA CGAAGAAGAA
AACGAGGTCA GCAGCTCGGG TTATGCTAAG ACTATGAGCG AGGGTTATCA AAAAGCGCAA
GCTGCAATGA TGGCTGAGCA AGCTAAAGAT GTTGACATCA TTATTACAAC GGCACTTATT
CCAGGTAAAC CGGCTCCGCT TCTTGTGACC AAAGAAATGA TAGCATCGAT GAAAGCGGGT
AGTGTGATCG TTGATTTAGC AGCGCAAGCA GGCGGTAACG CGGCACTCAC GGTTAAAGAT
GAAGTTTTCT TAACCGATAA CGGTGTAAAA ATCGTTGGCT ATACGGATCT TCCCAGCCGT
TTACCGACGC AATCAAGCCA GCTTTATTCA ACCAATTTAG TTAACTTGAT GAAGCTGCTT
TGTAAAGATA AAGACGGCAT TATCAATATT GACTTCAACG ATGAAGTTAT CCGCGGTGCA
ACCGTTGTCA AAGAAGGTGA AATTTCCTGG CCACCACCGG CAATCAATGT CAGTGCTGCA
CCTGCGCCTA AAGCAGAAGC TGCAAAATCG GCTACCGTTG TTGAGAAAAA ACCAGAAAAT
AAATGGATTA AACCCGCTGC AGCTGTTGTT GCTGCCATCC TATTTGGATG GCTTGCAAGC
GTCGCACCGG CAAACTTTCT CGCTCATTTT ACCGTCTTTA TACTGGCCTG TATTGTGGGT
TACGGCGTGG TTTGGAATGT TGCCCATTCT CTGCATACAC CACTAATGAG TGTAACCAAC
GCAATCAGCG GCATTATCAT CATCGGAGCG CTGCTGCAGG TAGGTCAAGG TAACGGTTTT
GTGACTACCC TGTCGACCAT TGCAATACTG ATCGCCACTA TCAATATCGT GGGTGGCTTT
ACCGTTACTC AGCGTATGTT GAAAATGTTC CAAAAGGATA AATAA
|
|---|
| Protein sequence | MQIGIPREIQ ENENRVAATP NTVELLIKQG FTFLVEKNAG IAASFSDQAY QNSGAEIGTD
KNLVWQSDII FKVNAPTDTE ITLMKEGATL VSFIWPAQNP ELLEKLTSKK ISVIAMDSVP
RTSRAQALDA LSSMANIAGY RAVIEAANQF GRFFTGQITA AGKVPPAKVL IIGAGVAGLS
ALGTAGSLGA IVRAFDTRPE VKEQVESMGA EFLVVEYEEE NEVSSSGYAK TMSEGYQKAQ
AAMMAEQAKD VDIIITTALI PGKPAPLLVT KEMIASMKAG SVIVDLAAQA GGNAALTVKD
EVFLTDNGVK IVGYTDLPSR LPTQSSQLYS TNLVNLMKLL CKDKDGIINI DFNDEVIRGA
TVVKEGEISW PPPAINVSAA PAPKAEAAKS ATVVEKKPEN KWIKPAAAVV AAILFGWLAS
VAPANFLAHF TVFILACIVG YGVVWNVAHS LHTPLMSVTN AISGIIIIGA LLQVGQGNGF
VTTLSTIAIL IATINIVGGF TVTQRMLKMF QKDK
|
|---|
| |