Gene Ping_0553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0553 
Symbol 
ID4623740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp707551 
End bp708903 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content43% 
IMG OID639795749 
Productmaltoporin 
Protein accessionYP_942006 
Protein GI119944326 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4580] Maltoporin (phage lambda and maltose receptor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTAT CAAAAATTAC CCTTGCATGC CTGCTGGCGA CCTCTGGTTT ATCTGTCTCG 
GGTGCAGCTA ATGCTGGCGA AACTGAAGGG TTTGAGTTCC ATGGCTATTT TCGTGCAGGG
GTATTAACCA GTGCTGAGCA TGATTTTAAA CAGTCAAATT TTTCGGGTCA AAAAGAAACC
TTGGGTCGAT TAGGCATTGA AGCTGATAAT GATGTGTCAG TTACATTGGC GAAGACTTGG
GCATTCGATG ACGATAAAAA AATAAAAATT GTAGTGAGTG CTTCGGGGAC AGATAGCGAA
AATTCATTAG GCACTAGCGC GGATGCTACC CATATGGGTA TTGGTCAAAC CTATGTTGAA
TTTGAAGGTG TTTCTCCAAG CGGTACTTTC TGGGGCGGTA CAAGAGATTA TGGTAAAGCT
AATTATATTT TTATGACCGA TTTCTTTTAC ACTGATATGT CGGGTACAGG TATTGGCGTG
ATGGATTATC AACTAGGTGA TACTTCATTG GACTTTGCTT ATATAGCCAG TGATCGAAAT
GATGATGTGA TTGATCGTTG GGCAACCGAT GACAGTGGTA ACCTTGCAAA TTTAAATAAT
TTGATGCACG CTTTTCATCT TTCAGCAACA TTTGGTGCAT TTGAACTTTC TGCTTTGTTA
AAGGCTATGC CCGATAACTG GGATGAAGAT GGTACCGAAT ATGCGGAAAC CGGTTTTGAC
TTAACCGCTA TCTACAACCT TGATAGCTTC TTTTTTATGC CCGGTAATGG TTTCTCTAAA
ATTATTGCCC AGGGTGGTGT AGGTCTGGGT TCAGGAAATT TACTGGGTGG CACAATCACC
GAGTATAATG CTTTTCGCCC CGGTTCACTG ACCCAGGGAC AGCACGATGA CTATGCTGCT
TGGCATCCAA GTGGCGGCGA AGCGACACGT CTTTTAACCT ACGTTGGTAA AGATGATGTA
TCAGCGCGTG TATTACTCTG GGGTGGTTAT TTCTTTGACA ACGGTATTAA GCTATTCCCT
TCAATTCAGG GACAATGGAA TGATCACGAA CAATGGGTTG GTAATCCAGG TTTCACAGAG
TACTGGCTCT CGGCAATGGT TCGTCCTATC TTCCCTGTAT CAAATAACTT CTTTGTGGCA
ACTGAATTTG GAGCGATGTA TACCAACTGG AATGGTGCCT CAGGGAATCA AGCTAAAGCA
ACCATTGCAC CAACGTGGAT TATTGGCACC GGTGCTGGAC CTGCACCGGA AATTCGTCTA
TTAGCGAGTT ATGTCAATAA TGCGTGGAAT GTAGATGATG TCGATAGTAA AAGTGACATT
ATTGTTGGTC TGCAGGCTGA TATGTGGTGG TAA
 
Protein sequence
MKLSKITLAC LLATSGLSVS GAANAGETEG FEFHGYFRAG VLTSAEHDFK QSNFSGQKET 
LGRLGIEADN DVSVTLAKTW AFDDDKKIKI VVSASGTDSE NSLGTSADAT HMGIGQTYVE
FEGVSPSGTF WGGTRDYGKA NYIFMTDFFY TDMSGTGIGV MDYQLGDTSL DFAYIASDRN
DDVIDRWATD DSGNLANLNN LMHAFHLSAT FGAFELSALL KAMPDNWDED GTEYAETGFD
LTAIYNLDSF FFMPGNGFSK IIAQGGVGLG SGNLLGGTIT EYNAFRPGSL TQGQHDDYAA
WHPSGGEATR LLTYVGKDDV SARVLLWGGY FFDNGIKLFP SIQGQWNDHE QWVGNPGFTE
YWLSAMVRPI FPVSNNFFVA TEFGAMYTNW NGASGNQAKA TIAPTWIIGT GAGPAPEIRL
LASYVNNAWN VDDVDSKSDI IVGLQADMWW