Gene Ping_0552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0552 
Symbol 
ID4623739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp706053 
End bp707057 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content41% 
IMG OID639795748 
Producttranscriptional regulator for galactose, periplasmic binding protein, LacI family protein 
Protein accessionYP_942005 
Protein GI119944325 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTGA TCACGATTAA AGAGGTATCC GATCTTGCGC AGGTCTCTCA GGCAACAGTA 
TCAAGAGCCA TCAATGGGCA CCCAACTGTT AAAGAGAGCA ATAAGCTCAA GGTGTTTGAA
GCAATCAAAA AACTTGGTTA TAAACCTAAC TCTTTCGCAC AGGCACTGGC GTCCAACCGT
TCAAATAGCA TCGGTATGCT GGTTGGTACA CTCGATGGCC CCTTCTTTGG TCCTTTAATG
CATAATGCAG AAAATATTAT TCGTCAGAAA AATATGCATT TAATTGTCAC CAGCGGCCAG
GAGTCGAGAA CCAAGGAAGT CGATTCTATT GCATTTCTCC AGTCTAAACA GGTTGATGGT
ATGATTATCC ATTCAGATAA ATTAACCGAT CAAGAATTAA TAACCATCGC GCAAAAAAAT
CCTGCAATGG TTATTTTAAA CCGCTATATT CCGGAATTAG ATAAACAGTG TATCTGCATA
GATAATGAAC TGGGCGGATA CCTGGCAACA AAATATTTAC TTGAAAATGG ACATACAAAA
GTAGGCTGTA TTACAGGTCA AATGAGTAAA ATTGACAGCC GTGATCGCTT TCAGGGATAC
AGAAATGCGC TGGCGGAGTT TTCTATCCCC TACGATACTA ATCTGGTTAT TGAAGGGCGT
TTTGATCATC AGGGCAATCA CGAGGTGGTC AGAAGATTGC TCAGCCGTGA TAATGGAATA
ACCGCTATTT TCTGTGAGAA CGATAATATC GCCCTGGCAG CTTATGATAT CTGCAACGAA
AAAAACTTGT CCGTAGGTGA TGATATTTCC ATTGTTGGTT TTGATAACGA TACCTACAGC
CAGCATATCC GTCCCAGACT GTCGACGGTC AACTTCCCCG TTGTTGACAT GGGTCTGGAA
GCGGCACACG CGGTGCTCGC GATGATCGAT AAAAAAAGCT ATCCATTCAA AAAAAGATTG
GTGCCTGAAT TAGTCATCAG AGATTCGGTA AAAAAAATAA AATAA
 
Protein sequence
MTLITIKEVS DLAQVSQATV SRAINGHPTV KESNKLKVFE AIKKLGYKPN SFAQALASNR 
SNSIGMLVGT LDGPFFGPLM HNAENIIRQK NMHLIVTSGQ ESRTKEVDSI AFLQSKQVDG
MIIHSDKLTD QELITIAQKN PAMVILNRYI PELDKQCICI DNELGGYLAT KYLLENGHTK
VGCITGQMSK IDSRDRFQGY RNALAEFSIP YDTNLVIEGR FDHQGNHEVV RRLLSRDNGI
TAIFCENDNI ALAAYDICNE KNLSVGDDIS IVGFDNDTYS QHIRPRLSTV NFPVVDMGLE
AAHAVLAMID KKSYPFKKRL VPELVIRDSV KKIK