Gene Ping_0550 details

Gene Information

• Locus tag: Ping_0550
• ID: 4623737
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Psychromonas ingrahamii 37
• Kingdom: Bacteria
• Replicon accession: NC_008709
• Strand: +
• Start bp: 701886
• End bp: 705425
• Gene Length: 3540 bp
• Protein Length: 1179 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 639795746
• Product: hypothetical protein
• Protein accession: YP_942003
• Protein GI: 119944323

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 31
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACTGTGA AAAATATAAG TACTTTAGTA GATAAGGTAC CAGAACAATT TCTTTCGCCA 
GAGGGCGATA AATCTTATCA ATCCAAAAAA GTAGATCAGA TGGAAAATTT ATCAAATAGT 
GTTTCAGGGA AGTTTATTGC CATTGATGGC GATAAATACT ATCAAATAAA AAATGTGGAT 
CAGATGGCGC CCTTTTTTAT CAGTGTTGTA TCAGCCAGTG ATCACTGGTT GTTTATTTCA 
TCTACGGGCT GTTTATCTGC TGGTAGAATA CGCCCAGAAA ATGCTTTATT CCCCTATAAA 
TCCGTAGATT ATATCCACGA GAGTGCCGAA AACACCGGCA GTAAAACCAT TGTTAAAGTG 
CAGACTAAAA ACGGTTGCAG AACATGGGAG CCCTTTAATC TGCAGCACAA TAGCCTTTAT 
GAGGTACAGC GTAATCTTTA TAAAAACATT GCTGGTGACA AGATTATTTT TGAAGAGATA 
AACCTTGATT TGGGGCTGAC CTTTAAATAT CAATGGGCGA CCAGTGACCA GTTTGGTTTT 
GTTAGAAGCT CAACGGTAAC AAATAATGAT CAGAAAGCCG TCGTATTTGA ACTGCTTGAT 
GGCATTCAAA ATATTTTACC CCCTAACGCG CCGCTTTCCC TTATGCAAAC CAGCAGTGCA 
TTAATTGATG CTTATAAGTG GAATGAATTA CTGCCTGAAT CCACACTCGC CACTTATAGT 
TTGTATGCAA AATTAAGTGA TCGAGCGGAG CCTGCTGAGT CACTGCTTGC CACATCAGTA 
TTTAGTATTA TTGATAATTG TCAGTCGGTT TTATTGTCAA GTCGGCAGTT AGGCGCTTTC 
CGTCGCGGCC AACAAATTAA TAATGAGGAA TTGTGCCGTG GCCTGAGAGG GGCATATTTT 
ATTCATAAAA AATGTCAACT CAGTGCCGGT CAACAAGATA GCTGGCAGAT TGTGGCTAAT 
ATCGATCAAT CTCATGCTGA TATTGCTGCG CTAAAACAAC ATATTCAGGC TGATGATCTT 
ATTAAAACCG CGGTAATAGG GTCAGTTGAA GCTAACCATC AGGATCTTAT TATGTTGATG 
GCGGGCAGCG ATGCCTATCA GAAAACGGCA GAAGAGGAGA CGACTGTCCA CCACTATGCC 
AATGTGTTAT TTAATAATAT GCGTGGCGGT GTTGTTGTCG ATCAATACTG GGTAGAAAAG 
CCTGATTTTG TTAAAACGCT GACCAGTGCC AACAAGGTTG TTGCAGCGAA TAATCGCGAC 
TTTTTTGCAA CGCTTCCTGA ACGTATCGCT TATCAAGCCT TGCTTGCATC GGCTGCAGAG 
CAGAACGACC CTCAGCTTTT ACGTCTTTGC CATGAATACC TGCCGTTAAC TTTTGGACGT 
CGTCATGGTG ATCCCAGCCG TCCATGGAAC CATTTTGAAA TTAAGTTAAA AGATACGAAT 
GGTGACCGAT TATTATCTTA TCAGGGTAAC TGGCGTGATA TTTTCCAAAA CTGGGAAGCA 
TTGGGCCTGA GTTATCCTCA CTTTATTAAG TCGTTTATCT CAAAATTTGT TAACGCATCA 
ACCATTGATG GCTATAATCC TTACCGTATT ACCAAAGCAG GGGTTGATTG GGAACAGCTG 
GAAGAAGATG ATCTCTGGGG TAATATAGGT TACTGGGGTG ATCACCAGAT TATTTATCTG 
CTTAAGTTTT TGGAATTATC AAAGAAATTC CAACCGCAAG AGCTTAAAGC GCTATTGAAT 
GCTGATATTT TCAGCTATGC CAATGTTCCC TATGAAATTA AAGACGTTGA TCAATTATTT 
GCCGATCCTA AAAATACCGT TATCTTCAAT AATGAAAAAC AAGCTGTTAT CGAAGCGAAA 
GTAGCACAAT TGGGCAGTGA TGGACGCTTG TTATTGAAGG CTGATGACAG TGTCTATCTG 
GTTAATTTAA CGGAGAAACT ATTAATACCT TTGCTGGCGA AACTGGGCAA CCTGGTGGTG 
GACGGTGGGA TCTGGTTAAA TACACAGCGC CCTGAATGGA ATGATGCCAA TAACGCCATT 
GTAGGCACGG GTCTATCGAT GGTGACTTTG TACTACATGC GTCGTTATAT TGCCTTTTTA 
CAAGCGTTAC TTATTGATCA TAGCGGTACA GTTGCGCTTT CTGCCGAGCT TGCAAAATGG 
GTTAGCAGTA CAGGCGAAAT TCTGCAGCAA GCCGCTGTTC TGATTGATGA TAATAAAATT 
AACAGTGAAG CACGTAACGA TCTGCTCAGA AAACTTGCCG GTGCTGCGGG TGACTACCGC 
GCTGTTGTTT ATAAAAATGG TTTCTCGGGT AAAATTGCGT TTGACTGCTC GGTTATCAAC 
GGAATGTTAA ACGCCAGCCT GCAGGTGATT GATCAAAGCA TTCAGACTAA TCTGCGTCAG 
GATGGCTTGT ATAATGCCTA TAACATTATT AATTGTACGC CTGATAATAT TAATGTTGAC 
GTGCTCTATC CGATGCTTGA AGGTCAGGTA GCAGTTTTAT CCTCGGGGGT ATTAACACCG 
GAACAAGCTG TTACTTTAAT AGATAATTTG TATGCGAGTG ATATGTTCCG CGCGGATCAG 
CAAACTTTTA TGCTCTATCC AGATCGTGAT TTATCGTGCT TTGCCGCTAA AAACTGTATT 
GATGGTACGC GTGTCAATGA CAACCGGCTG CTTAAATTAA TGGCTGAAAA AGGGGATCGC 
CGTTTAATTG AAGTCGATGC TGAAGGTGTT TATCATTTTA ATGCCAACTT TGAAAATGCG 
ACTTTCCTAA AAAATGCGCT TCAGGAAGTT AAAGCTGATT ACTTGAGTAT TGAGAGTGCC 
ACCTTCGCGG ACGTTCTAAT CTGCTATGAA GAGGTTTTTA ATCACCAGGC ATTTACAGGG 
CGCTCAGGGA CGATGTTCGG CTATGAAGGT TTGGGCAGTA TCTACTGGCA TATGGTCTCT 
AAGTTATTGC TTGCTGTTCA GGAAAACTAT TTTACAGCGT GGAACAACAA TGCGGATTCT 
GAAGCGACTG GTAAGCTTGC GGAGTATTAT TATAAAGTAC GCGCCGGGAT AGGTTTTAAT 
AAAACCCCTG ATGTTTATGG TGCGTTCCCG ACCGACCCGT ATTCTCATAC ACCCAAACAA 
GCCGGTGCTC AACAGCCTGG TATGACCGGG CAGGTAAAAG AAGAGATCCT GACTCGTTTT 
GGTGAATTGG GGCTGCTGGT TAAAAATGGT CAAATTTATT TCCAGCCAAC GCTGCTTAAA 
GAAACGGAGT TTTTGTCTGT GGACGACGAA TTTGAGTTTA TTGATATTAA CAGTGAATAT 
AAAAAAATCT CGTTAGCACC ACGTATGTTG GCATTTACTT ACTGCCAAGT TCCTTTCGTG 
TATGAGGTTG TAGGAGCTGA AGAGGCAGGC GTGACGGTTG AACATGAAAA TGGTTCAACG 
CTGCAGTTTA ATACATTAGC ACTGAGCAAC TTGATCAGTT CTCAAATATT TTCCCGTTGC 
GCTGAGATTG AACAGGTCAA GGTTTCTATT CCGGAAACTA TGTTATTGAA AACATATTAG 

 

Protein sequence

MTVKNISTLV DKVPEQFLSP EGDKSYQSKK VDQMENLSNS VSGKFIAIDG DKYYQIKNVD 
QMAPFFISVV SASDHWLFIS STGCLSAGRI RPENALFPYK SVDYIHESAE NTGSKTIVKV 
QTKNGCRTWE PFNLQHNSLY EVQRNLYKNI AGDKIIFEEI NLDLGLTFKY QWATSDQFGF 
VRSSTVTNND QKAVVFELLD GIQNILPPNA PLSLMQTSSA LIDAYKWNEL LPESTLATYS 
LYAKLSDRAE PAESLLATSV FSIIDNCQSV LLSSRQLGAF RRGQQINNEE LCRGLRGAYF 
IHKKCQLSAG QQDSWQIVAN IDQSHADIAA LKQHIQADDL IKTAVIGSVE ANHQDLIMLM 
AGSDAYQKTA EEETTVHHYA NVLFNNMRGG VVVDQYWVEK PDFVKTLTSA NKVVAANNRD 
FFATLPERIA YQALLASAAE QNDPQLLRLC HEYLPLTFGR RHGDPSRPWN HFEIKLKDTN 
GDRLLSYQGN WRDIFQNWEA LGLSYPHFIK SFISKFVNAS TIDGYNPYRI TKAGVDWEQL 
EEDDLWGNIG YWGDHQIIYL LKFLELSKKF QPQELKALLN ADIFSYANVP YEIKDVDQLF 
ADPKNTVIFN NEKQAVIEAK VAQLGSDGRL LLKADDSVYL VNLTEKLLIP LLAKLGNLVV 
DGGIWLNTQR PEWNDANNAI VGTGLSMVTL YYMRRYIAFL QALLIDHSGT VALSAELAKW 
VSSTGEILQQ AAVLIDDNKI NSEARNDLLR KLAGAAGDYR AVVYKNGFSG KIAFDCSVIN 
GMLNASLQVI DQSIQTNLRQ DGLYNAYNII NCTPDNINVD VLYPMLEGQV AVLSSGVLTP 
EQAVTLIDNL YASDMFRADQ QTFMLYPDRD LSCFAAKNCI DGTRVNDNRL LKLMAEKGDR 
RLIEVDAEGV YHFNANFENA TFLKNALQEV KADYLSIESA TFADVLICYE EVFNHQAFTG 
RSGTMFGYEG LGSIYWHMVS KLLLAVQENY FTAWNNNADS EATGKLAEYY YKVRAGIGFN 
KTPDVYGAFP TDPYSHTPKQ AGAQQPGMTG QVKEEILTRF GELGLLVKNG QIYFQPTLLK 
ETEFLSVDDE FEFIDINSEY KKISLAPRML AFTYCQVPFV YEVVGAEEAG VTVEHENGST 
LQFNTLALSN LISSQIFSRC AEIEQVKVSI PETMLLKTY