Gene Ping_0542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0542 
Symbol 
ID4623729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp692869 
End bp693513 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content47% 
IMG OID639795738 
Producthydrolase with alpha/beta-hydrolase fold 
Protein accessionYP_941995 
Protein GI119944315 
COG category[R] General function prediction only 
COG ID[COG3571] Predicted hydrolase of the alpha/beta-hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.52739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTTA TCTATAACGG GCCCACTCAA GGTCCTTTGT TTGTCTTTGC CCATGGTGCG 
GGCGCGCCGG CTAATGCCGA TTTTATGGAA AAAATTGCCG TGGGGCTTGC TTTGCGTGGA
ATCCGCGTGG CACGTTTTAA CTTTGCTTAT ATGCAGCAGC GCATTGATAA TGGCACGCGT
CGTCCGCCTG AGCGCGCAGA AAAGTTAGTA GTACAATTTG GTCAGCTGAT TGCGAAGCTT
AATCAACCTA TGGTCATTGG TGGTAAGTCA ATGGGTGGAC GTATTGCCAG TTTGCTTGCC
GCAGAGCTCG CCGATGATAA GGTTAAAGGG ATCGTCTGCC TGGGTTACCC ATTTCACCCT
GTGGGCAAAC CTGAAACATT AAGAACGGCA CATTTGCCTT CCATTCAGCA GAAGATGCTT
ATTATTCAGG GTGAACGCGA CAAACTTGGA ACCCGCGAAG AAGTACAGTC CTATGGATTG
CCAAAGGAGA TCCAATGGCT ATGGCTGGAA GATGGAGATC ACGATCTTAA ACCCAGGGTT
AAAAGTGGAT TTACCCATCA AGCCCACCTG CAAAAAGCAC TTGATAAAAT GGCGTTATTT
ATTATCAGTG CACTAGATGT AAAGACACTA GATAATCCCT TATAA
 
Protein sequence
MNLIYNGPTQ GPLFVFAHGA GAPANADFME KIAVGLALRG IRVARFNFAY MQQRIDNGTR 
RPPERAEKLV VQFGQLIAKL NQPMVIGGKS MGGRIASLLA AELADDKVKG IVCLGYPFHP
VGKPETLRTA HLPSIQQKML IIQGERDKLG TREEVQSYGL PKEIQWLWLE DGDHDLKPRV
KSGFTHQAHL QKALDKMALF IISALDVKTL DNPL