| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0540 |
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| Symbol | |
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| ID | 4623727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 690210 |
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| End bp | 691208 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639795736 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_941993 |
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| Protein GI | 119944313 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAAAA AATTAATGAC CCTTTCCCTT GGCACCGTTG CAGTACTTGC AAGCTTTAAT
GCATCAGCAA GTTGCGAGCC GGGCGAGATA GTAATCAAAT TCAGCCATGT AACCAATGAG
ACCAGCCACC CTAAGGGCAT AGCTGCTTCT TTATTATCTG AGCGAGTGAA TAAAGAGATG
GATGGCAAGG CTTGTATGGA AGTTTTTCCT AATACCACGC TTTATAATGA TGACCAGGCC
TTAGAAGCTA TTTTAAGCGG TGATCTACAG CTTGCGGCTC CTTCTTTATC CAAGTTTGAA
AAAATAACTA AAAAATTCCG CATTTTTGAT CTTCCCTTTT TATTTGCTGA TGTGGCCGCC
GTAGACCGTT TTCAAAATTC AGCATCCGGT GATATTTTGA AAGAGTCGAT GACCCGCCGA
GGAATCAAAG GATTGGAATT TTGGCACAAT GGCATGAAAC AGATGTCAGC GAGTAAACCT
TTGTTACTGC CAAGTGATGC TGAAGGTCTT AAGTTCAGAG TTCAAGCATC CGATGTGCTT
GTTGCTCAAT TTGAACAACT GGGTGCTAAC CCTCAAAAAA TGTCCTTTAG TGAAGTTTAT
GGTGGTCTGC AAACCAAAGT TATCGATGGT CAGGAAAATA CTTGGTCAAA TACCTATGGT
AAAAAATTCT TCGAAGTACA AGATGGTGTG ACTGAAACAA ATCACGGTAT TCTCGATTAC
CTGCTTGTGA CCTCCGATGA TTGGTGGAAG GGTTTACCAA CAGATGTACG TGAGCAGTTA
GCCACAATAA TGTCTGAAGT GACGCAAACC AGAAATGGTG AGTCAATGAG AGTTAATGAA
GAAAACAAGC AAAAAATTAT TGATGCCGGC GGCGTGGTGC GTACGTTAAC AGCTGAGCAG
CGTCAAGCCT GGGTTGACGC ACTTAAACCT GTCTGGAAAA AATTCGAAAA AGATATCGGC
AGTGATCTTC TTGAAGCTGC AATAGCATCA AATAAATAA
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| Protein sequence | MLKKLMTLSL GTVAVLASFN ASASCEPGEI VIKFSHVTNE TSHPKGIAAS LLSERVNKEM
DGKACMEVFP NTTLYNDDQA LEAILSGDLQ LAAPSLSKFE KITKKFRIFD LPFLFADVAA
VDRFQNSASG DILKESMTRR GIKGLEFWHN GMKQMSASKP LLLPSDAEGL KFRVQASDVL
VAQFEQLGAN PQKMSFSEVY GGLQTKVIDG QENTWSNTYG KKFFEVQDGV TETNHGILDY
LLVTSDDWWK GLPTDVREQL ATIMSEVTQT RNGESMRVNE ENKQKIIDAG GVVRTLTAEQ
RQAWVDALKP VWKKFEKDIG SDLLEAAIAS NK
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