| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0529 |
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| Symbol | |
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| ID | 4624841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 675332 |
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| End bp | 676666 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639795725 |
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| Product | RNA methyltransferase, TrmA family protein |
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| Protein accession | YP_941982 |
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| Protein GI | 119944302 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0101242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCAGT TCTTTAAAGC AGCACCCACA AATAGTATCA AAAATCATAT TTTAAAAAAC
ATAAAAGTTG AAAAATTAGA TCACCGGGGA CGTGGTTTAG CCTATTTTCA GAATAAACCT
CTTTTTATTG ATGGGGCGCT TGCAGGTGAA TTACTTGAAG TACAAATTGT AGAAAGTAAA
AAACGCTATA GCAAAGGGAA GATTAAAAAG ATCATCAAGG CCAGTGAGTT AAGAATTACT
GCCGCTTGTC CTCATTATCA GGAGTGCGGT GGCTGTGATC TGCAGCATCT AAACCAAGCT
GCGCAGATCC AGATTAAATC AGATGGGCTA TTATCATTAT TTCAACGTTT TGCTAAAAAA
GTACCGCAAC AACTGGAAAA ACCGATTATT GATAAGGCAT GGGAATATCG TCGTACAGCG
CGTTTTGGTT TACAATTTGA TAAAAAAAAT AAACAGTTAA AAATGGGCCT TAGACGCGCC
CAAAGTAATG AGCTTATCGA CCAAAAAGTT TGCCCTGTAT TATTACCTGA ATTAGAGTGT
TTAATTCCGC CCCTTAAAAT ATTATTAAAT AGCTTACAAT GCAAAGCCCA TTTAGGGCAT
GTGGAGCTGC TTTACGCAGA TCAAGGTGCG GTGGTTTTAT TACGTCATAT GAAAACCTTA
ACCAGCCCGG ATTTACAACT AATAACGGCT TTTTCAGCGC TACAAAAAGT GAACTTTTTT
GGACAGGCTT CCTCTAACCA GTCTGTTTGT CTGGCCGGCG AGGCAAATCT AAGTTACCGG
TTGCCGGAGT GGGATTGTTC CTTGAGTTTT ACACCCACCG ATTTTTTACA AGTAAACAGT
GATATTAATA AAAAAATGGT CAGTCAGGCT ATGCAGTGGC TCGCTTTAGA AAAAAACGAC
AGTGTCTTAG ATCTTTTCTG CGGTTTAGGG AATTTCACTT TACCGATCGC GCGCCAGGTT
GAATCGGTAG TGGGTATTGA AGGGGTTCAA CAAATGGTGG ACCGTGCAAC GGCCAATGCA
CAATTAAATA ATTTACAGAA TGCCCGATTT TATCAAGCCG ACTTAAGCGG CGAAAATCTT
ATCGAGCAGG AGTGGGCCAA CCAAAACTTT AATAAGGTTT TATTAGATCC GGCGCGTGCT
GGCGCGTTGG ATTGTTTAGC TTTTATAGCA CAAAAAAAAC CATCGCATAT CCTCTATGTA
TCCTGTGATC CGCTGACCCT GGCCCGGGAT AGTCAAGTGT TGCTTGATAA GGGTTATAAA
CTGGATAAAT TAGGTTTGTT GGACATGTTC CCGCAAACGG CTCATATGGA ATCGATGGCA
CTGTTTACTG GTTAG
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| Protein sequence | MAQFFKAAPT NSIKNHILKN IKVEKLDHRG RGLAYFQNKP LFIDGALAGE LLEVQIVESK
KRYSKGKIKK IIKASELRIT AACPHYQECG GCDLQHLNQA AQIQIKSDGL LSLFQRFAKK
VPQQLEKPII DKAWEYRRTA RFGLQFDKKN KQLKMGLRRA QSNELIDQKV CPVLLPELEC
LIPPLKILLN SLQCKAHLGH VELLYADQGA VVLLRHMKTL TSPDLQLITA FSALQKVNFF
GQASSNQSVC LAGEANLSYR LPEWDCSLSF TPTDFLQVNS DINKKMVSQA MQWLALEKND
SVLDLFCGLG NFTLPIARQV ESVVGIEGVQ QMVDRATANA QLNNLQNARF YQADLSGENL
IEQEWANQNF NKVLLDPARA GALDCLAFIA QKKPSHILYV SCDPLTLARD SQVLLDKGYK
LDKLGLLDMF PQTAHMESMA LFTG
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