Gene Ping_0504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0504 
Symbol 
ID4623410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp639893 
End bp641170 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content43% 
IMG OID639795700 
Productserine/threonine transporter SstT 
Protein accessionYP_941958 
Protein GI119944278 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3633] Na+/serine symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0511559 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCAA CCCCCACTCT CATTCAACGA TTTTTAAACG GAAGTTTAGT TTTACAAATA 
GTAATAGGCA TTGTAGCCGG TTTAATACTG GCAAGCTTTT CACCAACAAG CGCCTTGTCA
GTCTCCTTTT TAGGCAGTTT ATTCGTCAGT GCTTTAAAAG CTGTCGCACC CATTTTAGTT
TTTGTGTTAG TTGCCTCTTC GATTGCGAAT CAACAAAAAG AAACCCGTAC CAATCTTAAA
CCTATTATTA AGCTTTATTT GCTTGGCACG CTATTCGCAG CATCTACCGC TGTTATGGTG
AGTTATTTTT TCCCTACCAC TTTAGTACTG GTTGCAACCG ATATTCAAGC AACGCCGCCA
AATGGGATCC TTGAAGTATT AAATACCCTT TTATTTAAAA TCGTTGATAA CCCGGTAAAT
GCATTAGTGA GCGGCAATTT TATTGGTATT TTAGCATGGG CGGCAGGTTT AGGCTTTGCT
CTGCAACGTG CCAACCAAAG TACCAAACAG GCATTACATG ATATCTCCAA TGCTGTGACC
CGCATTGTTC ATTTAGTGAT ACGTTTTGCA CCTCTTGGTA TTTTTGGCTT AGTCGCAGGG
ACTATTGCCG AAACAGGCTT TGACGCGCTT TTCGGCTACA CCCATTTATT AGCGGTATTA
CTTGGCTGTA TGATCTTAAT TGCCCTGGTG ATTAACCCAA TTATTGTCTA TGGAAAAACG
AAAAAAAATC CATACCCGTT AATTTTCAGA TGTTTACGTG AATCTGGTGT CACGGCCTTC
TTTACTCGCA GTTCAGCTGC CAATATCCCG GTGAACATGG CGTTGTGTGA GAAATTAGAG
CTGCACAAAG ATACTTACTC TGTATCAATT CCGCTTGGTG CAACTATCAA TATGGCGGGT
GCTTCAATCA CCATCACAGT ATTGACCTTA GCGGCAGTGC ATACCTTGGG CATTGAATTT
GATATTGCCA CGGCTATTTT ATTAAGTGTG GTGGCTGCTG TTTCGGCTTG CGGGGCATCC
GGTGTTGCAG GCGGTTCTTT ATTATTAATT CCACTTGCCT GTGGATTATT TGGTGTACCC
AATGAAGTCG CAATGCAGGT GGTCGCAATA GGTTTCATTA TTGGTGTTGT TCAAGATTCA
GCGGAAACTG CATTAAATAG CTCAACGGAT GTGATCTTTA CAGCAGCGGC TTGTTACGCA
GCAGAAGAAT TACCAGCAGC GGATACGATT GAAACGCTGG AAACGCTGGA AACGCTGGAA
ACGACGGCAA AAGCATAA
 
Protein sequence
MTPTPTLIQR FLNGSLVLQI VIGIVAGLIL ASFSPTSALS VSFLGSLFVS ALKAVAPILV 
FVLVASSIAN QQKETRTNLK PIIKLYLLGT LFAASTAVMV SYFFPTTLVL VATDIQATPP
NGILEVLNTL LFKIVDNPVN ALVSGNFIGI LAWAAGLGFA LQRANQSTKQ ALHDISNAVT
RIVHLVIRFA PLGIFGLVAG TIAETGFDAL FGYTHLLAVL LGCMILIALV INPIIVYGKT
KKNPYPLIFR CLRESGVTAF FTRSSAANIP VNMALCEKLE LHKDTYSVSI PLGATINMAG
ASITITVLTL AAVHTLGIEF DIATAILLSV VAAVSACGAS GVAGGSLLLI PLACGLFGVP
NEVAMQVVAI GFIIGVVQDS AETALNSSTD VIFTAAACYA AEELPAADTI ETLETLETLE
TTAKA