Gene Ping_0502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0502 
Symbol 
ID4623408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp636881 
End bp637426 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content40% 
IMG OID639795698 
Productnucleotide phosphate derivative pyrophosphohydrolases, MutT/nudix family protein 
Protein accessionYP_941956 
Protein GI119944276 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID[TIGR00586] mutator mutT protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0414588 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGATA CTGACGGTTA CCGTCCAAAT GTAGGTATCA TCATTTGTAA TAATAATGCG 
CAGGTTTTAT GGGCGAAACG ATTTGGACAG CATTCATGGC AATTTCCTCA AGGGGGAATC
AAAGAGGGGG AAACGCCTGA ACAAGCCATG TATAGAGAAC TGTACGAAGA AGTTGGTTTA
AAACCTGAGC ACGTTAAATT ATTAGCAACT AGCCGTCATT GGTTACGTTA TAAATTACCT
AAACGATTAG TTCGTTGGGA CTCGCCTGAT CCAGTTTGCA TCGGGCAGAA ACAGCGCTGG
TTTTTATTAC AATTGATTTC AGATGAGCAG CAAATTGAGT TTGAGGCTTG CGGCAATCCT
GAATTTGATG CTTGGCGCTG GGTAACTTAT TGGTATCCTG TTCGTCAGGT TGTATCGTTC
AAATGTGAAG TTTACCGTTG TGCCCTAAAA GAATTTTCAG CTGTTGCTTT TTCGTTAATG
AAAAAAAGTT CAGACAAGAA AAGGAATAAA CGGCCTCGTC GGGCATCTTT TTATAAAAAA
AGATAA
 
Protein sequence
MIDTDGYRPN VGIIICNNNA QVLWAKRFGQ HSWQFPQGGI KEGETPEQAM YRELYEEVGL 
KPEHVKLLAT SRHWLRYKLP KRLVRWDSPD PVCIGQKQRW FLLQLISDEQ QIEFEACGNP
EFDAWRWVTY WYPVRQVVSF KCEVYRCALK EFSAVAFSLM KKSSDKKRNK RPRRASFYKK
R