| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0501 |
|---|
| Symbol | |
|---|
| ID | 4623407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 635596 |
|---|
| End bp | 636270 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 639795697 |
|---|
| Product | DNA mismatch repair protein |
|---|
| Protein accession | YP_941955 |
|---|
| Protein GI | 119944275 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3066] DNA mismatch repair protein |
|---|
| TIGRFAM ID | [TIGR02248] DNA mismatch repair endonuclease MutH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.56276 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0450922 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTTA ATTCTCCCCG TTCAACCGCC GAACTGCTAA GTCGATGTGA GCAAATTGCT
GGCCATTCTC TGGAGGAACT GGCCGAGATG GCCGGCCAGC CTATGGCTAA GGATTTACGC
AGCAATAAAG GCTGGGTGGG TCAACTTATA GAATGGCACC TAGGCGCCAC CGCCGGCAGC
AAACCTGAGC AAGACTTTAA GCATCTCGGT ATTGAACTAA AAACAATTCC AATTGATCAA
AATGGCAAAG TATTGGAAAC TACCTTTGTC TGTAGCGCCC CTATTTTAAA TACCCGTCAG
CTAAATTGGG AAAACTCCAA CGTGCGCAAT AAGATCAGCA AGGTTTTATG GGTTCCGGTT
CAGGGAGAGC GAACTGTCCC GCTTTGTGAT CGCATCGTCG GTAATAGTTT TTTATGGTCA
GCTAATCAGC AACAAACCCA ATTATTAAAA TTGGACTGGA ATGAAATAAT GGAAAAAATT
GCGCTTGGCC AAATAGAATC AATCACAGCT CGGAATGGTC AAGTGATGCA ACTCAGGCCA
AAGGCGGCTA ATGGGAAGTG CTTAACCAAT GCGGTTGGAG AAGACGGACA ATTAATAAAA
GTTCGCCCAC GGGGTTTTTA CTTAAAAAAG ACATTTACAC AATCAATTAT TAGTCAATAT
TTCAATATAA AATAA
|
|---|
| Protein sequence | MDFNSPRSTA ELLSRCEQIA GHSLEELAEM AGQPMAKDLR SNKGWVGQLI EWHLGATAGS
KPEQDFKHLG IELKTIPIDQ NGKVLETTFV CSAPILNTRQ LNWENSNVRN KISKVLWVPV
QGERTVPLCD RIVGNSFLWS ANQQQTQLLK LDWNEIMEKI ALGQIESITA RNGQVMQLRP
KAANGKCLTN AVGEDGQLIK VRPRGFYLKK TFTQSIISQY FNIK
|
|---|
| |