Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0499 |
Symbol | |
ID | 4623405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 633551 |
End bp | 635125 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639795695 |
Product | lytic transglycosylase, catalytic |
Protein accession | YP_941953 |
Protein GI | 119944273 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1388] FOG: LysM repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0979868 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTTT TTCTGTCGGT TTTTATTCTG TTTTTTGTTA CCGCCTGTAC TAGTACAGGT GAGTTGGCTG GGCCCGAACC CTCCAGAAAA AACATTGAAG AGCTACAACA AGAGATGTTC AGTCGGTCTG CCGAATGGAG AACGGCACCT TTTATGGACG AAAAGTCCCT TCCCGAAAGT TATGATAATC TTTGGTTAAA GTTAGCTGAA GGTTTTGAAT TTGAAGTGCC TCAAAACGCG CGTGTCGCTA AACAACGGGA TTATTTTTTA AAGCATCCAA ATCACCTGGC GGAAGTTTCA AAACGAGCAG AACCTTTTTT ATATCTGATT ATTGAACAAA TAGAAGCAAA AAACTTACCC CTTGAACTTG CTTTATTACC TGTTGTAGAA AGTACTTTTA ATCCCTTTGC TTATTCGCAG AGTCATGCTT CCGGTTTGTG GCAATTTATG CCGGCCACAG GGGTACGATT CGGATTAACT CAAGACTGGT GGTACGACGG TCGTCGCGAC GTTTATGCTT CAACAGATGC AGCTTTAACC TATATGGATA TATTACATAA CTATTTAAAT GAAGACTGGT TACATGCACT CGCGGCCTAT AACTCTGGAG AAGGGCGGGT AGAAAGAGCG GTTCGCGCTA ATAAGAAATA CAATAAACCG ACAGATTACT GGCATTTGTC CTTGCCAATA GAGACGCAAG AGTACGTCCC AAAGCTATTA GCTTTAGTTG ATATTTTACG TAACCACAAA AAGTATGGTA TTGAGCTGCC AGTGATAGCA AATAAGCAGG TACTGACTTA CGTAGATACC GGTTCGCAAC TAGATCTTGC TTATGCGGCA GAATTGGCCG AGTTATCACC TGACGATCTT CAGTTATTAA ATCCCGCTTA TAATCGCTGG GTAACTTCAC CAAACGGTCC TCACCGATTA CTTATCCCGA CAAAAATTGC ACAGCAGTTT AGTCAAAAAT TGGCTAATAC GGCGCAAAAT AAGCGCACCA GATGGTCTCG TTATACTGTG CAGTCAGGTG ATAACCTGGG GTTCATTGCG CGCGAAAATT ATACAACGAT AAATATTCTT AAACAGGTTA ACAACCTTGA TAGTGCATTT ATAAAAATAG GACAGCCTTT ACTTATTCCG TTTGCAAGTG AGGCCCAGAA GGATGATTTT TCTCGTCAGG CGAGGCGCTT TGAAGGTCAA CAAGCCTCTG CAAACAAAAC AAAAAAGAAA GTTATCTACA CAGTAAGTGA AGCTGATACG CTCTGGGATA TTAGTCGTGA CTTTAATGTG AGGGTTAAAG AGATTGCCAA ATGGAATACA ATCAATAGTA CAGAACCGTT ACAGTTGGGG CAAAAATTAA CCGTTTGGAA AGCGATTAAA TCCACACCCA ATAAAAACGA TACTCACCGT ATGACCTATC AGGTACGCGC CGGAGACTCT CTTCACCTGA TTGCATCAAA ATTTAATGTA AAGCTCGTCG ATTTAGTGCG TTGGAATGAG TTGAATAAAG GTGAATATAT TCAGCCGGGG CAAAAATTAG AACTCTATGT TGCAGTGCAA AAATCTCGGA CTTAA
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Protein sequence | MKFFLSVFIL FFVTACTSTG ELAGPEPSRK NIEELQQEMF SRSAEWRTAP FMDEKSLPES YDNLWLKLAE GFEFEVPQNA RVAKQRDYFL KHPNHLAEVS KRAEPFLYLI IEQIEAKNLP LELALLPVVE STFNPFAYSQ SHASGLWQFM PATGVRFGLT QDWWYDGRRD VYASTDAALT YMDILHNYLN EDWLHALAAY NSGEGRVERA VRANKKYNKP TDYWHLSLPI ETQEYVPKLL ALVDILRNHK KYGIELPVIA NKQVLTYVDT GSQLDLAYAA ELAELSPDDL QLLNPAYNRW VTSPNGPHRL LIPTKIAQQF SQKLANTAQN KRTRWSRYTV QSGDNLGFIA RENYTTINIL KQVNNLDSAF IKIGQPLLIP FASEAQKDDF SRQARRFEGQ QASANKTKKK VIYTVSEADT LWDISRDFNV RVKEIAKWNT INSTEPLQLG QKLTVWKAIK STPNKNDTHR MTYQVRAGDS LHLIASKFNV KLVDLVRWNE LNKGEYIQPG QKLELYVAVQ KSRT
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