| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0481 |
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| Symbol | pilC |
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| ID | 4626861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 609052 |
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| End bp | 610284 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639795674 |
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| Product | type II secretion system protein, type IV pilus biogenesis protein PilC |
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| Protein accession | YP_941937 |
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| Protein GI | 119944257 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTAA AAAAGAAAAC TAAAGGACCA GTCATTGATA CTTTTAAATG GAAAGGCCTT
AATCGTAAGG GCGCTGCAGT ATCAGGCGAA ATACAGGCTG AGAGTGTTGC AGAAGTTAAA
ATTGAACTGC GTAAGCAGAA GATTAATGTC ACTAAAATAC AGAAAAAATC CAAACCACTT
TTCTCCTTCG GTAATAAAAT AAAACCCATG GATATTGCGA TTATTTCTCG CCAGATAGCC
ACTATGCTCG GAGCAGGTGT ACCTTTAGTA CAAGGTTTAC AATTAATTGC CAAAAGCAGC
GAAAAACCGG CATCGCGAAA ATTAATGAGC ACAATTTCTC AAGAGGTGGC AACGGGCACA
CCACTTTCAC AAACCCTGCG TGGTCATTCC CTTTATTTTG ATGATTTATA CTGCGATCTT
GTTTATGCCG GTGAGCAGTC TGGTGCATTA GATACAATTT ACGACCGTAT CTCTATTTAT
AAAGAAAAAT CTGAAATTTT AAAATCAAAA ATTAAAAAAG CGATGTTTTA TCCAGCGGCG
GTACTAACGG TTGCCGGCCT GGTCACTCTG CTTTTACTGC TCTTTGTTAT TCCGCAGTTT
AAAGATATCT TTGAAGGTTT TGGCGCAGAG CTACCCGCTT TTACGCTGTT TGTACTGGGC
ATTTCCGACT TTGTACAGTC TTACTGGTAT ATGATAGTCG GAGTGGTAAT CGTTTTTCTC
TATCTGTTTA AAAAGGCGTA TCGCCGCTCG CAGAAAGTGC GTGACAATAC CGATAGATTT
GTTCTTAAGA TACCAGTGAT CAGTACCATT TTAGATAAAG CGGCGGTGGC ACGTTTTGCA
AGAACCCTTT CTACTACCTT TGCTGCCGGT ATTCCTTTGG TTGACGGGCT AGTTTCCGCT
GCGGGCGCTT CCGGAAATTA TATTTATCGC ACTGCGATTC TCAACGTGCG TGCGGAGGTA
ATTGCAGGCA TGCAGATGCA CATCGCCATG AAAACGACCA CTGTTTTCCC CGATATGATA
ACCCAGATGG TGATGATCGG TGAAGAGGCG GGTAATTTGG ATGGTATGTT AAGCAAGGTT
GCTGATATCT ATGAACAGCA GGTTGATGAT GCTGTTGATT CCTTAACCAG CCTGTTGGAG
CCGATGATCA TGGTGGTTTT AGGGGTAGTG GTCGGCGGTT TGATTGTGGC TATGTATTTA
CCGATCTTCG CGTTAGGTAC CGTTGTTGGT TAA
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| Protein sequence | MAVKKKTKGP VIDTFKWKGL NRKGAAVSGE IQAESVAEVK IELRKQKINV TKIQKKSKPL
FSFGNKIKPM DIAIISRQIA TMLGAGVPLV QGLQLIAKSS EKPASRKLMS TISQEVATGT
PLSQTLRGHS LYFDDLYCDL VYAGEQSGAL DTIYDRISIY KEKSEILKSK IKKAMFYPAA
VLTVAGLVTL LLLLFVIPQF KDIFEGFGAE LPAFTLFVLG ISDFVQSYWY MIVGVVIVFL
YLFKKAYRRS QKVRDNTDRF VLKIPVISTI LDKAAVARFA RTLSTTFAAG IPLVDGLVSA
AGASGNYIYR TAILNVRAEV IAGMQMHIAM KTTTVFPDMI TQMVMIGEEA GNLDGMLSKV
ADIYEQQVDD AVDSLTSLLE PMIMVVLGVV VGGLIVAMYL PIFALGTVVG
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