Gene Ping_0476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0476 
Symbol 
ID4626856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp602675 
End bp603100 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content43% 
IMG OID639795669 
Productmethylation site containing protein 
Protein accessionYP_941932 
Protein GI119944252 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4969] Tfp pilus assembly protein, major pilin PilA 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.991113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG TACAACAAGG TTTTACATTA ATTGAGCTGT TAATCGTAAT AGCGATTATC 
GGTATTCTGG CAGCCGTAGC GATTCCGTCT TATAACGCTT ATACCCAAAA AGCAAAATTC
TCAGAGTTAA TATTAGCGAC TGGAGCGACT AAAAGTGCTT TAGAGGTTTG CGCTCAATTT
AACGCATCTG CCGTTGGTTG TACCGCAGCT ACAGTTGCAG GAGTAGCTGC TGCTGCTGCG
AATGCTAAGA TAACTACTGT AGCAGTGACT CTTACGGCAT TAGCTCCTGT CATTGTAGCG
ACTGCGACTC CCGCTGTAAC GGGGATGGGT TTTGCTGGGG TGTATACCTT GAGTGGAGTA
CTAAATGCTA CTTATGGTAC AATCGCTTGG ACCAGTACTT GTGTTCCAGA AACACTATGT
AATTAA
 
Protein sequence
MKKVQQGFTL IELLIVIAII GILAAVAIPS YNAYTQKAKF SELILATGAT KSALEVCAQF 
NASAVGCTAA TVAGVAAAAA NAKITTVAVT LTALAPVIVA TATPAVTGMG FAGVYTLSGV
LNATYGTIAW TSTCVPETLC N