Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0448 |
Symbol | |
ID | 4623629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 569828 |
End bp | 571756 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639795642 |
Product | hypothetical protein |
Protein accession | YP_941905 |
Protein GI | 119944225 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.341791 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00166798 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAATTAA AAATAACTAT AATATTACTT GGCTTTTATT GTATTTTTAT CAATGCACTA ACGGGGTCAA TTCTTGTACC AACGTTTCAC TTGGATGGTG CTTTTCAGAC TGCCAGTGGT TTATTTCGCC TAGACTCAGG ACAACTACCG GGGAAAGATT TTTTCCCCTA TTTAGGTATC GGCCCCATTT TAATAATTTT CCCTGTTTTT AAACTGGCAG GAAGTGATCT CATTGCAAGT TCATTTTCAA CACTATTTGT CACAAGAGTT TTAGCCTGGG TTTCTGTGTC ACTAGTTGTG CATTTAATTT TAAGAAGTAA ATCGTTTATA TCATCACTCT GCATAGGAAT AATTCTGTTG ATAATCCTTA TAGGAATTGA CAAGAGTGGA TTTTTCATCA ATAAACCATT TTCTTTTTTA ATCGACCCAG GCACCTCATT AAGACCAGTG AGGGCTTCTG CACCCTATTT GCTTGGAATA CTCAGCTATT TTATAGTAAC CACTTCCATC CCCTATTCTT TAAAAAAGTA TTTGGCTGGA GTATCAGCGG GTATATTTCT GCTTTGGTCA AATGACTATG CATTACCAAC AGTTGCAACG TTTTCTCTAT TTTTTTGTAT TTACTTTTAT AAAAATTCTG CAACTAACTG GCTCAAAGAT GCGCTAGTAT TTTCCTTAAT TTTAATATCA ACATGGCTAG TGCTTTTGTT GTTGATAACC GCGGGACATC CATTAGAGTT ATTAAAATAT AATTTCAGAG ATGTTGCGAC TGATCAATGG TGGTATTTCA GCCCTTATTA CGATCGTATA TTCCATTTAT CAGACCTTGG AAAATTGATA AATGCAGATC TACTCATACT ACTAGTATTT TCCATTTATG CTTACAAGAC AAAATACATT GAATCAATAA TTTTATGTAT AATTGGTTTT GCCCTATTCT TTGGCGGAGT CCTTGCATCT ATAGGCGGCC ACTTTACCAA AATTTATTTT AACGCTTATC ATGCTTGGGC AATAATAATA GCTATTATTT TCACAATAAA CTTAATTGTT AAATTAATTA GTAAAAATAT CCAATCAAAT CAAATTTTAT TCCTAAGAAA CTTAGTCAGC CCTAGCATTA TAATTTGCCT ACTTATGGTA GCTTCGGCTG GCTCCTATAA GTATTATCGT AATTTAAATA GTGTTCAAAA CAATAAGTAT TTTTATTATA TTGATGAGTT TGGAGGGTAC TTAAATGTTA AGTGGAAAGA CTATATAGAG TTCATTAAGC TTAATAAACA CAAACCTATC ATTGAGGAAT ATTGGGGCTT AGCCAGTGCA TTAAATAGAA CATTCTCACC CTGGCCCGTT GATTCGGTTA TTCATGCTTT AGGTGACGTG AGAAAAAAAG CCCAAGATAG CTTGGTTAAG GCAGATTATA TAATCACTTC AAAAAATGGT AATTTTTCCA TTTGGCAACC TTGGAGCGTA AGCCAAAATT TTTGGTTTTA TAAAACGTTA TTTTCAGAAT GGGAACCCAT TTTTCACTCA CCTGCAACCA CCATTTGGAA AAAGCTCCCA CATAAGCGAA CAGAGCAAAA TGTGGAATGT GAAATTACTA AAAATAGAGA TGCATTTACC ATAAAAACAG ATAAAACCGG TTTAATTAAT GTGAAGCTGA ATTATTCAAT AACCGCTAAA GGCCGTTACT TATCTATGGT AAAAAACAAT TTATCCTATG CTTCTGATGC TGCCGGCTAT GTTTCTATAA ATCCAAAATC AGATAATGCC TTTTTTCCAG TCCTTAGCAA AGGAGATGAG AATGAAATTT ATGATGCGAA AATTGTTGGT AGCGATAATG GTGAAATAAT TATCGAGTCA TGTGAAGCGT CTCGATTTAT CATTGACCTT GACGATGAGG ATGAAATTTA CCCTTCAGTC TTTAAATAA
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Protein sequence | MKLKITIILL GFYCIFINAL TGSILVPTFH LDGAFQTASG LFRLDSGQLP GKDFFPYLGI GPILIIFPVF KLAGSDLIAS SFSTLFVTRV LAWVSVSLVV HLILRSKSFI SSLCIGIILL IILIGIDKSG FFINKPFSFL IDPGTSLRPV RASAPYLLGI LSYFIVTTSI PYSLKKYLAG VSAGIFLLWS NDYALPTVAT FSLFFCIYFY KNSATNWLKD ALVFSLILIS TWLVLLLLIT AGHPLELLKY NFRDVATDQW WYFSPYYDRI FHLSDLGKLI NADLLILLVF SIYAYKTKYI ESIILCIIGF ALFFGGVLAS IGGHFTKIYF NAYHAWAIII AIIFTINLIV KLISKNIQSN QILFLRNLVS PSIIICLLMV ASAGSYKYYR NLNSVQNNKY FYYIDEFGGY LNVKWKDYIE FIKLNKHKPI IEEYWGLASA LNRTFSPWPV DSVIHALGDV RKKAQDSLVK ADYIITSKNG NFSIWQPWSV SQNFWFYKTL FSEWEPIFHS PATTIWKKLP HKRTEQNVEC EITKNRDAFT IKTDKTGLIN VKLNYSITAK GRYLSMVKNN LSYASDAAGY VSINPKSDNA FFPVLSKGDE NEIYDAKIVG SDNGEIIIES CEASRFIIDL DDEDEIYPSV FK
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