| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0440 |
|---|
| Symbol | |
|---|
| ID | 4625453 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 557733 |
|---|
| End bp | 558944 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 639795635 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_941898 |
|---|
| Protein GI | 119944218 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.438778 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0102055 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATAGAG TAAAAATATT TTTGGGTCGT ACTGTTATTT TTTCTTTATA TTTTTTAATC
AGATTGTTTT CTTTGCTCCC TAAGAAAAAG AAAAAAAAAT CAGGCAATAT CATTGTGTTA
ACTGGAACCT TCTATTCAAA AAACTGGATT GATGCTCATT TGCGACCTTT AGTGACATGT
AAAAGTGTTA AACATGTTTA TATTGTTTGT AATGAACTTG ATTATGATTT GCAGGGATTG
AGTGTTGTTG CCCCTTCTAA AATTTCAACT AAACTTATTG GTTCAACACT CGCGCGTTTA
ATTGCCTTTG CTGTTTGTGT GGTAAAAAAA AATCCTGATT ATATCGGTGG GTTTCATATT
TTATTTAATG GGACGTTATC TATTTTATTC GCGAATATAC TCAGGTGTCG CTCAATCTAT
TTCAGTGTAG GAGGCATTAC AGAAACTCTC GTAGTGGGGA AAACCGAGAA TAATTTTTTT
AAATTTTTAA ACGGTAAAGA TGATTTTTTA ACTGCGTATA TTTGTAAAAT AGCAGCAAAT
GCAACGCAAA TTATAACCAT GGGGAATGGT GCCAAACTAT TTTTCGTTGA AAATGGTGTT
AATAATCATA TTGTTCATGT TATTTCCGGA GCTATAAATA AAAATATTTT TTATCCATCT
GTACAAGCCG GTGATAAAAA ATATGATTTG GTGCTTACGG CGAGATTATC TAAAGTAAAG
CAAGTGGAGT TGTTGTTAAA AATATTAGCC TATTTACAAC AGCAGAATTT TCTTTGCAAT
GCTTTAATTA TTGGAGACGG GCCTTTATTG GAAAGCCTAA AAAAACAGGC AGAAGAGCTT
ACAATTAGTG AGCAAGTTGA TTTTGTTGGT CACCAAAATG ATATTGTCAG CTGGCTGCAT
CAAGCAAAAA TATACATATT AACATCACGT TCAGAAGGAT TGTCCCTTTC AATGCTGGAG
GGGTTGAAAT CAGGGTTACC TGCAATTGTA CCGAATGTCG GTGATTTATC TGATGTGTTG
ATTCATGGGT ATAATGGAGC GTTAATTGAA AATCACTCTA TTGATGATTT TGCTCACCAA
ATAACCAGCT TGCTCTCGAA CCCTCAAAAA CTTGATGAGT ACTCTCAAAA TGCAATTGCT
TCGACTCATC GCTTTGATCT TGAATGTGTA AGAAGACAAT GGGAGGCAGT ATTTATGGTG
GAGGACCGTT AA
|
|---|
| Protein sequence | MYRVKIFLGR TVIFSLYFLI RLFSLLPKKK KKKSGNIIVL TGTFYSKNWI DAHLRPLVTC
KSVKHVYIVC NELDYDLQGL SVVAPSKIST KLIGSTLARL IAFAVCVVKK NPDYIGGFHI
LFNGTLSILF ANILRCRSIY FSVGGITETL VVGKTENNFF KFLNGKDDFL TAYICKIAAN
ATQIITMGNG AKLFFVENGV NNHIVHVISG AINKNIFYPS VQAGDKKYDL VLTARLSKVK
QVELLLKILA YLQQQNFLCN ALIIGDGPLL ESLKKQAEEL TISEQVDFVG HQNDIVSWLH
QAKIYILTSR SEGLSLSMLE GLKSGLPAIV PNVGDLSDVL IHGYNGALIE NHSIDDFAHQ
ITSLLSNPQK LDEYSQNAIA STHRFDLECV RRQWEAVFMV EDR
|
|---|
| |