| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0424 |
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| Symbol | |
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| ID | 4625437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 536389 |
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| End bp | 537744 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639795620 |
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| Product | two component, sigma54 specific, transcriptional regulator, Fis family protein |
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| Protein accession | YP_941883 |
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| Protein GI | 119944203 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR02915] putative PEP-CTERM system response regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0197322 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGTCAAAAA ACGAAACTAA AACATTATTA ATTGTTGAAG ATGATATAGG GCTGCAAACG
CAGCTTAAAT GGCATTTTTC TGATTACAGT GTTGTTGTTG CAGCAAGCTT AGATAATGCA
ATTGCTGCTA TTCGTTTACA TGAACCACAA GTAATGGTGC AAGATTTAGG TTTGCCCCCT
GATCCTGACG GTGTAACCCA AGGTTTTTCT TTGGTACAAC AAGCCCTGTC CATAAATCCA
CATATGAAGT TAATTGTGAT GACCGGCAAT GATTGCAATG AACATGCCTT AAAAGCGGTC
AGCCTTGGTG CCTATGATTT TTACAGTAAA CCGGTAAATC CTGATACTTT GGCACTTATC
GTACAACGTG CATTTCATAT GCACCAACTT GAAACCAAAA ATAGAATTTT TAATTTATCT
AAAAGCAGTC ATCTTGAAGG ACTAATTACT GCAGATGAAC GCATGTTAAC TATTTGTAAG
CTAATCGAAA AAGTTGCCCC CACCAGCGCA GCTTGCTTAC TCTTAGGTGA AAGTGGTACC
GGCAAAGAGG TATTAGCAAA ATCACTGCAT GCATTAAGTA CCCGCAATGA ACATCCCTTT
GTTGCCATTA ACTGCGCTGC TCTTCCTGAA AATTTATTTG AAAGTGAACT GTTTGGCTAT
GAAAAAGGTG CCTATACAGG GGCAATAAAA AGTACACTCG GTAAATTAGA ACTAGCAAAT
GGTGGAACAG TATTTCTCGA TGAAATAGGT GAAATGCCAC TACTATTACA AGCCAAGTTA
CTGCGCTTTC TACAAGAAAA AGTAATTGAA CGTATTGGCG GTCGCAAATT AATCCACCTG
GACACTCGGA TTGTTTGCGC CACTAATAGA AATTTAGAAG AAATGATGGC TAGCGGTGAA
TTCCGCGAAG ATCTCTATTA TCGGATCGCA GAGATACAAA TAGATATCCC TCCATTAAGA
GAGCGAGGCT CCGATAAAGT CCTATTAGCC CGCTATCTGC TTCAAAAGTA CACTCAAAAA
GAAAACCTAA AAGTCACAGG TTTTACTAAA GATGCAATTA ATGCAATAGA AGCGTATTCA
TGGCCCGGTA ATATCCGAGA ACTTAACAAT AAAATAACTC GTGCAGCCAT TATGTGTGAG
CAAAAAAATA TAACAGCAGA AGATATCGGA TTAAAATCAT CTGACAGTAG CCCGCTTAGC
TTAAAAGTGA TTAGAGAAAG TGCTGAAATA AACGCACTAA AAACAACACT TAATGCAACT
GATAATAACA TTTCTGCGGC CGCAAAATCA CTTGGCATAA CCAGACCGAC ACTCTATGAC
TTAATGAAAA AGCATCATTT AAATACCCCT CTGTAA
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| Protein sequence | MSKNETKTLL IVEDDIGLQT QLKWHFSDYS VVVAASLDNA IAAIRLHEPQ VMVQDLGLPP
DPDGVTQGFS LVQQALSINP HMKLIVMTGN DCNEHALKAV SLGAYDFYSK PVNPDTLALI
VQRAFHMHQL ETKNRIFNLS KSSHLEGLIT ADERMLTICK LIEKVAPTSA ACLLLGESGT
GKEVLAKSLH ALSTRNEHPF VAINCAALPE NLFESELFGY EKGAYTGAIK STLGKLELAN
GGTVFLDEIG EMPLLLQAKL LRFLQEKVIE RIGGRKLIHL DTRIVCATNR NLEEMMASGE
FREDLYYRIA EIQIDIPPLR ERGSDKVLLA RYLLQKYTQK ENLKVTGFTK DAINAIEAYS
WPGNIRELNN KITRAAIMCE QKNITAEDIG LKSSDSSPLS LKVIRESAEI NALKTTLNAT
DNNISAAAKS LGITRPTLYD LMKKHHLNTP L
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