Gene Ping_0398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0398 
Symbol 
ID4624298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp506338 
End bp506892 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content38% 
IMG OID639795594 
ProductRDD domain-containing protein 
Protein accessionYP_941858 
Protein GI119944178 
COG category[S] Function unknown 
COG ID[COG1714] Predicted membrane protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.173398 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAAAC ATAACCACAA TAATGAACAG ATAAAAATTC TGCAACAACA GTATCAAAGT 
TGCCCGCGCG CTAATTTTTT AAAACGAACA GGCGCCTATA TCTACGACTT GTTTGCTGTT
TCAGCTTTGC TAATGTTAGC CGGAATACTT GCGATTATAG TCGTGATTAT CGCAAGTAAC
ACCGGCCTAA TAAATATTGA TGCTTATCAA GATGTTGCCG ATTTTCTCGC TTCCAGCCAA
CTATTTGCAT TATATCTGGC AATCATCATC ATTGGCTTTT ACAGTTATTT CTGGACCCGA
GGCGGTCAAA CTATAGGTAT GAAAGCGTGG CGATTACGTG TTCAAAATAG CGATGGTAGC
AATATTTCCT TTACTCAATC ATTAATTCGT ATGGCAACGT CAGCCTTTGG CTTAGGCAAT
TTTTTGGTTT TTTTTGGGAA TAAAAGTGCC TTTCAAGATC AGTGGGCAGA ATGTGAGATG
GTCGTATTAA CAAAAGAGTT AAGCGATTGG AAAGGTTTTA AGGGCATGGG ATTTATGGAT
CAGGATAAAA AATAA
 
Protein sequence
MVKHNHNNEQ IKILQQQYQS CPRANFLKRT GAYIYDLFAV SALLMLAGIL AIIVVIIASN 
TGLINIDAYQ DVADFLASSQ LFALYLAIII IGFYSYFWTR GGQTIGMKAW RLRVQNSDGS
NISFTQSLIR MATSAFGLGN FLVFFGNKSA FQDQWAECEM VVLTKELSDW KGFKGMGFMD
QDKK