Gene Ping_0396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0396 
Symbol 
ID4624296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp504058 
End bp505134 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content41% 
IMG OID639795592 
Productpermease YjgP/YjgQ family protein 
Protein accessionYP_941856 
Protein GI119944176 
COG category[R] General function prediction only 
COG ID[COG0795] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.167769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATACTTC TTCGTTATTT GATGCTCGAA ACATTTAAAA GCCAGATCGG TATTCTGTTT 
GTTTTAGTGC TTATTTTTGT TAGTCAAAAA TTTATAACCA TTCTTGCTCA AGCTATTAAT
GGTGTTATCC CTGCAGATTT GGTAATGACC CTGTTGTATT TGAACTTACC ACAACTGGGT
ACGCTAATGT TGCCTATTAG TTTTTATCTT GCAGTGCTTT TTGCCCATGG CAGGTTACAC
GGCGAAAGTG AAATGATCGC GATGAGCTCC TGTGGATATA GTCCCAATAA TGTCTTGAAA
GCGACTCTGT TATTATCCTT TTTAACCTTC GCTTTTGCGG CATATAACAG TTTGTATCTT
GCACCGCTTA GTGAAGATAA AATGATTAGC GTTATCGAAG AAGCTCAAGC GAATACCAGT
TCGGCGACAC TGATTGAGGG ACGTTTTCAT AAAACCTCAG GGAACGGCAG CGTGGTTTAC
ATTGAAAAAT CCGCTGATAA AAAGTTAGAC AAAATCTTTG CAGCGCATTG GCCGGAAGAT
AGGAAACAAG CTCCATCAGT ATTGACCGCC GCAGAGGGTT ATCTTGAGTC TAAAAAAGAT
GGTACCTGGC TGACCTTAAC AGATGGTCAG CGTTATGCCG GCATTGTTGG ACAACATGAG
TTTGATCATA GTGAGTTTAA GACGTACGAA GTACATATCG CTAATAGAGA GGTGCAAAAG
CAGGTGCGTG GCGTTCAGGC CTTACCGACC GCTGCACTAT TTTCTGTAGA CAATCCTAAA
TATCAGGCAG AACTGCAGTG GCGAATAGGT ATTCCAGTAT CAATATTATT AATGACTTTT
ATGGCTGTTC CATTAGCAAA AGTTAACCCG AGACAGGGAC GTTATTCAAA GCTATTACCT
GCCTTAGCAT TATATTTAAC CTTTTTCTTG CTGCTGAGTA CGGCCAAGAG TCTGATTGAA
GATGGGTCTC TACCCGTTTT CAGTATCTGG ATTGTACAAA TCAGCTTTTT GCTGTTGGGC
ATTATATTAC ACCTGCAAAG TTTAGGTAAA TTTACCAAAG TGACTTTACG CAGGTGA
 
Protein sequence
MILLRYLMLE TFKSQIGILF VLVLIFVSQK FITILAQAIN GVIPADLVMT LLYLNLPQLG 
TLMLPISFYL AVLFAHGRLH GESEMIAMSS CGYSPNNVLK ATLLLSFLTF AFAAYNSLYL
APLSEDKMIS VIEEAQANTS SATLIEGRFH KTSGNGSVVY IEKSADKKLD KIFAAHWPED
RKQAPSVLTA AEGYLESKKD GTWLTLTDGQ RYAGIVGQHE FDHSEFKTYE VHIANREVQK
QVRGVQALPT AALFSVDNPK YQAELQWRIG IPVSILLMTF MAVPLAKVNP RQGRYSKLLP
ALALYLTFFL LLSTAKSLIE DGSLPVFSIW IVQISFLLLG IILHLQSLGK FTKVTLRR