Gene Ping_0394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0394 
Symbol 
ID4624294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp501773 
End bp502255 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content39% 
IMG OID639795590 
ProductDNA polymerase III chi subunit, HolC 
Protein accessionYP_941854 
Protein GI119944174 
COG category[L] Replication, recombination and repair 
COG ID[COG2927] DNA polymerase III, chi subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAGG TTGTTTTTTA CGTTTTCACT ACGGAAGAAA AATCAAGCAG TGTAGCCATA 
AGTGCTCATT TTGCGTACGC TTGCAGAATA GCGGCGTTTT TTTATGCACA AAATAAAAAA
GTGTTCATCT ATACCGATTC AAAAGAAGAT GCATTTGCGG TCGATGAATA TTTATGGCAG
TTTGACGGTG ACAGTTTTGT GCCGCACAAC TTGTTAGGTG AAGGGCCAAA ATTTGGTACG
CCCGTTGAAA TAAGCTGGCA AGTCCCGCTG CACCCTCGCC CTATTTTAAT TAATTTAAGT
CAAAAAACGC CTGATTTTGC AATCAATTTT CAAAAAATTA TTGATTTTGT TCCGTTTCCG
GAACCCCAAA AAATTGCAGC ACGAATACGT TACAGTACCT ATAGAAAAAT GGGGCTAACG
CTTTCTACTC AAACCGTTGA GAGTAATTCA ACGGTTGAGT CAACCAACAA AACAGAAGAT
TAA
 
Protein sequence
MSQVVFYVFT TEEKSSSVAI SAHFAYACRI AAFFYAQNKK VFIYTDSKED AFAVDEYLWQ 
FDGDSFVPHN LLGEGPKFGT PVEISWQVPL HPRPILINLS QKTPDFAINF QKIIDFVPFP
EPQKIAARIR YSTYRKMGLT LSTQTVESNS TVESTNKTED