Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0385 |
Symbol | tbpA |
ID | 4624191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 490823 |
End bp | 491821 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639795581 |
Product | thiamine transporter substrate binding subunit |
Protein accession | YP_941845 |
Protein GI | 119944165 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4143] ABC-type thiamine transport system, periplasmic component |
TIGRFAM ID | [TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily [TIGR01276] thiamine ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0796265 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCGCA TAGTGAAAAA AATCATTCCT TTAATGGCCT TTTCTGTCAT TATTTCAATG CCGGTATTGG CTGATAAACT GGTCGTTTAT ACCTATGATT CGTTTGCTTC AGATTGGGGA CCCGGCCCTA AAATTAAACA GGCCTTCGAA AAAAACTGCG CTTGCAGTCT GGAATTTGTT GCCTTGGACG ATGGTGTTTC AATTTTAAAT CGATTGCGTT TAGAAGGGAA AAACACTAAA GCCGATATAT TGCTGGGCCT CGACAATAAT TTAATGACTG AAGCCAAAAA GACGGGGTTA TTAGCAAAGC ACAAGGTTGA TACGAGTAAT GTGATCCTTG CCAATGGTTG GTCAGATAAT ACCTTTGTGC CGTTTGATTA TGGTTATTTT TCCTTTGTTT ATAATAAAGA AACCCTGTTA AATCCTCCTG CAAGCCTGAA AGAATTAATT GAGCAACGTC AAGATATTAA CGTTATCTAC CAGGATCCCC GGACTTCGAC GCCAGGACTG GGGTTAATGT TATGGATAAA ATGGGTTTAT GGTGATCAAG CCGATGACGC ATGGAAAAAG CTGGCGAAAA AGACCGTGAC AGTCACTAAA GGTTGGTCTG AAGCTTATAG TATGTTCTTA AAAGGGGAGG CTGATATGGT ACTTTCTTAT TCAACCTCCC CCGCTTATCA TATTATTGCT GAAGGGAAAA ATCAGTATGC TGCAGCCAAT TTCTCTGAAG GTCATTACAC GCAAGTGGAA GTTGCCGCAA AAGTTAAAAG CAGTAAAAAT GAAAAACTTG CAGATAAGTT TATGGCATTT ATTGTCAGTG ATGAATTCCA ATCACTGATG CCGACCGGGA ACTGGATGTA TCCGGTTACT GATGTCGCGC TTCCTGAAGG GTTTAAAAAT TTAACCATAC CCTCAACGTC TTTTTCATTC AGCGCAGATA AGGTCGACAA TAATAGAAAA GTATGGATAA GAGAGTGGCA GAGCTCTTTA ATTTATTAA
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Protein sequence | MERIVKKIIP LMAFSVIISM PVLADKLVVY TYDSFASDWG PGPKIKQAFE KNCACSLEFV ALDDGVSILN RLRLEGKNTK ADILLGLDNN LMTEAKKTGL LAKHKVDTSN VILANGWSDN TFVPFDYGYF SFVYNKETLL NPPASLKELI EQRQDINVIY QDPRTSTPGL GLMLWIKWVY GDQADDAWKK LAKKTVTVTK GWSEAYSMFL KGEADMVLSY STSPAYHIIA EGKNQYAAAN FSEGHYTQVE VAAKVKSSKN EKLADKFMAF IVSDEFQSLM PTGNWMYPVT DVALPEGFKN LTIPSTSFSF SADKVDNNRK VWIREWQSSL IY
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