Gene Ping_0379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0379 
Symbol 
ID4624185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp485881 
End bp486351 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content51% 
IMG OID639795575 
Product17 kDa surface antigen 
Protein accessionYP_941839 
Protein GI119944159 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4520] Surface antigen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.65511 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAG TGACGGTATT GTTAATAATT ATTGCATTTT TACTGGTTGG TTGCACACAG 
CCGATAGGCT CCAAGGAGGG AGCAGGAACC CTGCTTGGTG CGACCACCGG TGCCATACTC
GGTTCCAATG TGGGTAAAGG AAAGGGCAAT GTTGTAGCTA TTGCTATTGG TACTCTGGCG
GGTGCCCTGT TTGGTCAAGA AATAGGTCGC TCACTGGACC GAGCCGATCG CATTGCCATG
GGGCAGAATG CCCAGTACTC ACTGGAACAT ACACGCAGCA ATGAAACGAC CCGTTGGAAT
AATCCTGATT CCGGTAACAG CGGTTCAATC ATGCCCACCC GAACCTATCA GCAGACAACG
GGTCAATATT GCCGCGAGTA TCGCCAGACA GTAGTGGTTG GTGGCAAAAA GCAGGACGCA
TACGGCACGG CCTGCCGTCA GCCCGACGGC AGCTGGATAA TTAATAATTA A
 
Protein sequence
MKQVTVLLII IAFLLVGCTQ PIGSKEGAGT LLGATTGAIL GSNVGKGKGN VVAIAIGTLA 
GALFGQEIGR SLDRADRIAM GQNAQYSLEH TRSNETTRWN NPDSGNSGSI MPTRTYQQTT
GQYCREYRQT VVVGGKKQDA YGTACRQPDG SWIINN