Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0376 |
Symbol | |
ID | 4624182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 481833 |
End bp | 482909 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639795572 |
Product | A/G-specific adenine glycosylase |
Protein accession | YP_941836 |
Protein GI | 119944156 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1194] A/G-specific DNA glycosylase |
TIGRFAM ID | [TIGR01084] A/G-specific adenine glycosylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.798144 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAATCACG AAGATTTTAG TCAACGCATC ATCGCATGGC ATCAAAAATT TGGCCGTAAA ACATTACCCT GGCAACAGGA TAAAAGTCTT TATCGAACAT GGGTGAGCGA AGTCATGCTG CAACAAACAC AAGTTGCCAC TGTGATCCCC TATTTTAATA AGTTTATGCG TGCTTTTCCA ACTATCTCAT ACCTTGCCAA TGCGCCTTTA GATGAAGTAT TGCATCACTG GACTGGACTC GGCTACTACG CCAGAGCGCG TAATTTACAT AAAAGTGCGC AATTTATTCG TGATAATTAT GCAGGGGATT TTCCGGAAGA GTTTCAACAA GTGCTGGATT TACCCGGGAT TGGACGATCC ACTGCAGGGG CTATTTTATC TCTGACCTTG AATCAAAACT TTGCTATTTT AGATGGTAAC GTCAAACGTG TCCTCACTCG CCATCAAACT ATTGAAGGCT GGACAGGTGG AAAGTCCGTT GAAAATACCC TATGGCAACT TGCTGAAAAA CTAACACCGG CAAAACAGAC CAACATATTT AATCAGGCCA TGATGGATAT GGGGGCAATG GTTTGCACGC GCAGTAAAGC AAATTGTGTA GAGTGCCCTG TTCAGGACGA TTGTTTAGCG CTTGCTGACG GGACAGTGAA AGCTTACCCG ACACCCAAAG CTAAAAAGAA GATTCCAATA AAAACAGCTG TGATGCTGGT ACTGTGCAAA GACGGTAAAA CACTGCACTT AAAAAAACGT CCACCGGTAG GTATCTGGGG TGGATTATGG TGTTTTCCCG AATATGAAAG TGAAGCATTA TGTCTGGCAG CTATTCAAGC ACAGGGCATT GAACAGTTTA ACAGCACCCT GTTACCCGCA TTTCGTCATA CTTTTAGCCA TTTTCATTTT GATATAACCC CGCTAAAAAT TGACGTTTCG ATCATAGACA CAAAACAAGT AATGGAAGAA AATGACACTC TTTGGTATAA CTTACACCAC CCACAAAAAA TTGGGTTAGC AGCAGCAACA ACAAAAATTA TAACCGCTGT TAACAAAAAC CTCTCAAAGG AGAAGATAGA TGACTAG
|
Protein sequence | MNHEDFSQRI IAWHQKFGRK TLPWQQDKSL YRTWVSEVML QQTQVATVIP YFNKFMRAFP TISYLANAPL DEVLHHWTGL GYYARARNLH KSAQFIRDNY AGDFPEEFQQ VLDLPGIGRS TAGAILSLTL NQNFAILDGN VKRVLTRHQT IEGWTGGKSV ENTLWQLAEK LTPAKQTNIF NQAMMDMGAM VCTRSKANCV ECPVQDDCLA LADGTVKAYP TPKAKKKIPI KTAVMLVLCK DGKTLHLKKR PPVGIWGGLW CFPEYESEAL CLAAIQAQGI EQFNSTLLPA FRHTFSHFHF DITPLKIDVS IIDTKQVMEE NDTLWYNLHH PQKIGLAAAT TKIITAVNKN LSKEKIDD
|
| |