Gene Ping_0357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0357 
Symbol 
ID4624141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp459328 
End bp461424 
Gene Length2097 bp 
Protein Length698 aa 
Translation table11 
GC content42% 
IMG OID639795552 
Productelongation factor G 
Protein accessionYP_941819 
Protein GI119944139 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.931415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGATT TAAGTAAATA CAGAAATATT GGTATTTTTG CCCATGTTGA TGCGGGTAAA 
ACAACAACCA CAGAGCGTAT CCTAAAACTG ACTGGTACAA TCCACAAAAC CGGTGAAGTG
CATGATGGTG AATCTACAAC TGACTTTATG GAACAGGAAG CTGAGCGCGG TATTACTATC
CAGTCTGCAG CGGTAACTTG TTTCTGGAAA GACCACCGTT TTAACGTTAT TGATACTCCT
GGGCACGTTG ACTTCACAGT AGAAGTTTAC CGTTCTCTCA AAGTATTGGA TGGCGGCATC
GGTGTATTCT GTGGTAGTGG TGGTGTTGAA CCGCAATCAG AAACAAACTG GCGTTATGCG
AATGACTCAA AAGTTGCACG TATTATCTTT GTTAATAAAT TAGACCGTAT GGGTGCTGAT
TTTTACCGCG TGATTGAGCA GACTAAAAAA GTACTAGGTG CTAACCCGCT AGTCATGGTT
TTACCTATCG GTATTGAAGA TGAATTCAGT GGTGTTGTTG ACTTATTAAC ACGTAAAGCA
TATATCTGGG ATGCGACTGG TCTTCCAGAA AACTATGAAA TTACTGATAT TCCAGCTGAT
ATGCTTGAAT TGACTGAAGA ATACCGTGAA AAATTGATCG AAACTGCCGT TGAGCAAGAC
GATGATCTAA TGGAAGCGTA CCTGGAAGAG GGTGTTGAGC CTTCTATGGA AGAACTTAAA
CGTTGTATCC GTAAAGGAAC ACGTACTATG GAATTCTTCC CAGCTTACTG TGGTTCTGCC
TTCAAAAACA AAGGTATTCA AAATATTCTT GACGCTGTTG TTGATTACCT GCCTTCTCCA
ACAGAAGTTG ATCCACAACC ACTTACGGAT GAAGAAGGCG AACCAACTGG TAAGTTTGCA
ACTGTCTCTA CAGAAGAAAC ATTTAAAGCC TTAGCATTTA AAATTATGGA TGACCGTTTT
GGTGCTTTAA CCTTTATACG TATCTATTCC GGTACGCTTA AGAAAGGCGA TACCATCCTT
AACTCCTTTA CGGGTAAAAC TGAGCGTGTT GGCCGTATGG TTGAGATGCA GGCAGATGAT
CGTAAAGAGC TATCCGCAGC ACAAGCCGGT GATATCATGG CTATCGTTGG TATGAAGAAC
AACGTTCAAA CGGGCCACAC TTTATGTGAT CCTAAAGACC CGATTATCCT GGAAGCAATG
GTATTCCCTA ACCCGGTAAT CTCTATCTCT GTTACACCTA AAGATAAAGG TTCAACTGAG
AAGATGGGTA TTGCTATCGG TAAAATGGTT GCAGAAGATC CAACCTTTAA AGTTGAAACT
GATGTTGATT CAGGTGAAAC TATCCTGTCT GGTATGGGTG AGCTTCACTT GGATATCAAA
GTTGATATCC TTAAGCGTAC CTACGGTGTT GACCTTGCTG TTGGTGAACC TCAAGTTGCT
TACCGTGAAA CTATCACCGA AGAAATTGAA GATAGCTACA CACATAAGAA ACAGTCTGGT
GGTTCTGGTC AGTTCGGTAA AATTGATTAC CGTATCAAGC CTGGTGAACC AGGTAGTGGT
TTCGTCTTCA CTTCTAAAGT TGTTGGCGGT AACGTACCAA AAGAATTCTT CCCGGCGATT
GAGAAAGGCT TTAAGGGAAT GATGGATACC GGTGTACTAG CTGGCTTCCC AGTACTTGAC
GTTGAAGTTG AAGTTTATGA TGGTGGTTTC CATGCCGTCG ATTCATCTGC AGTTGCATTT
GAATTAGCAG CACGTGGTGC ATTCCGTCAG TCAATTCCAA AAGCGGGTGC ACAACTTCTT
GAACCAATCA TGGCTGTAGA TGTATTTACG CCTGATGATC ACGTGGGTGA TGTTATCGGT
GACCTTAACC GTCGTCGTGG TATGATTGCC GGCCAAGAAG CAGGAACTAG TGGTGTTCGT
ATTAAAGCTG ACGTACCTCT TTCAGAAATG TTTGGTTACA TTGGTTCTCT ACGTACAATG
ACATCAGGCC GTGGTCAGTT CTCTATGCTG TTTAAAAACT ATATGCCTTG TCCAAACAAT
GTTGCTGAAG GCGTAATCGA AAAAGTTAAA GCTGATAAAG CTGCTAAAAA GAAATAG
 
Protein sequence
MKDLSKYRNI GIFAHVDAGK TTTTERILKL TGTIHKTGEV HDGESTTDFM EQEAERGITI 
QSAAVTCFWK DHRFNVIDTP GHVDFTVEVY RSLKVLDGGI GVFCGSGGVE PQSETNWRYA
NDSKVARIIF VNKLDRMGAD FYRVIEQTKK VLGANPLVMV LPIGIEDEFS GVVDLLTRKA
YIWDATGLPE NYEITDIPAD MLELTEEYRE KLIETAVEQD DDLMEAYLEE GVEPSMEELK
RCIRKGTRTM EFFPAYCGSA FKNKGIQNIL DAVVDYLPSP TEVDPQPLTD EEGEPTGKFA
TVSTEETFKA LAFKIMDDRF GALTFIRIYS GTLKKGDTIL NSFTGKTERV GRMVEMQADD
RKELSAAQAG DIMAIVGMKN NVQTGHTLCD PKDPIILEAM VFPNPVISIS VTPKDKGSTE
KMGIAIGKMV AEDPTFKVET DVDSGETILS GMGELHLDIK VDILKRTYGV DLAVGEPQVA
YRETITEEIE DSYTHKKQSG GSGQFGKIDY RIKPGEPGSG FVFTSKVVGG NVPKEFFPAI
EKGFKGMMDT GVLAGFPVLD VEVEVYDGGF HAVDSSAVAF ELAARGAFRQ SIPKAGAQLL
EPIMAVDVFT PDDHVGDVIG DLNRRRGMIA GQEAGTSGVR IKADVPLSEM FGYIGSLRTM
TSGRGQFSML FKNYMPCPNN VAEGVIEKVK ADKAAKKK